Expression Database

Tissue Summaries

Expression Database

Data Source

Gene

collagen, type IX, alpha 1

Theiler Stage

Tissue

metanephros

Images

	Metanephros.
	Nephrogenic zone & cortex.
	Medulla.
	Perihilar interstitium.
	Metanephros.
	Pelvis & papilla.
	Nephrogenic zone & cortex.
	Metanephroi low magnification.

Submitters

Principal Investigator(s):	Melissa H Little, University of Queensland, Brisbane, Australia, m.little@imb.uq.edu.au
Authors:	Han Sheng Chiu, Kylie Georgas, Bree Rumballe
Submitted By:	Kylie Georgas, University of Queensland, Brisbane, Australia, k.georgas@imb.uq.edu.au
Archive ID:	42
Submission ID:	uq_161006_10

Expression Mapping

Expression Strengths Key:

	Present (unspecified strength)
	Present (strong)
	Present (moderate)
	Present (weak)
	Uncertain
	Not Detected

Expression Patterns Key:

	Homogeneous
	Graded
	Regional
	Spotted
	Ubiquitous
	Restricted
	Single cell
	Contains note

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Probe

Gene:

Symbol: Col9a1

Name: collagen, type IX, alpha 1 (MGI:88465)

Probe ID:

MGI:2389673 (maprobe:4189)

Name of cDNA:

RIKEN clone 1110031E13

Sequence ID:

5' primer sequence:

CCAGCCTCAAGAGACCAGAC

3' primer sequence:

CGATGTTAATACGACTCACTATAGGGTCAAACTCCTGGGAAGAGGA

5' primer location:

76

3' primer location:

775

Origin of Clone used to make the Probe:

		Strain:
		Tissue:

Probe Type:

RNA

Type:

antisense

Labelled with:

digoxigenin

Visualisation method:

alkaline phosphatase + BM purple

Lab Probe ID:

509

Specimen

Other Staging System:

15.5dpc

Tissue:

metanephros

Strain:

CD1

Genotype:

Wild type

Sex:

unknown

Specimen Preparation:

section

	Fixation Method:	4% paraformaldehyde
	Embedding:	paraffin

Experiment Notes:

20 metanephros 7um sections. Batchscan180906_23.vsi SISH290906

Linked Publications

Linked Submissions

Acknowledgements


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