News

The hosting and delivery of the GUDMAP resource will soon be from the University of Southern California (USC) as NIH funding for resources is now restricted to US-based institutions. In the last few years here in Edinburgh we have developed a new version of the site, based on a UX survey, and we would welcome your feedback on how well it provides a new experience to find images and data. We believe it provides a much easier and more intuitive querying mechanism.

Note this alternative site WILL NOT become the new GUDMAP3 web interface but we hope to incorporate aspects of this in other projects. Please let us know what you think.

The Edinburgh GUDMAP group

Database Statistics
Assay TypeEntriesGenes
All In Situ Hybridisation (ISH):107643692
Wholemount ISH (WISH):73462896
Section ISH (SISH):34181437
OPT ISH:5931
Immunohistochemistry (IHC):27241
Transgenic Reporters:13538
Microarray:467-
Sequencing:374-
 More ...

Image courtesy of Southard-Smith group

Gene expression: Sox10

Image courtesy of Andrew McMahon group

Gene Expression: Gata3

Image courtesy of Melissa Little group

Gene Expression: Wt1

Image courtesy of Kevin Gaido group

Gene expression: Dhh

Image courtesy of Melissa Little group

Gene expression: Dppa5a

Brunskill et al.

Developmental Cell, 2008 Nov; 15(5):781-791

Image courtesy of Chad Vezina group

Gene expression: Mif

Georgas et al.

Dev Dyn. 2011 Aug; 240(8):spcone. doi:10.102/dvdy.22697

Georgas et al.

Dev Biol. 2009 Aug15;332(2):273-286

McMahon et al.

J Am Soc Nephrol.2008 Apr;19(4):667-71

Mugford et al.

Dev Biol. 2009 Sep 15;333(2):312-23. Epub 2009 Jul 8

Image courtesy of Chad Vezina group

Gene expression: Sox10

Gandhi et. al.

Dev Cell, 2013 Sep 16;26(5):469-82.

Image use policy

The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) is a consortium of laboratories working to provide the scientific and medical community with tools to facilitate research. The key components are:

  • a molecular atlas of gene expression for the developing organs of the GenitoUrinary (GU) tract
  • a high resolution molecular anatomy that highlights development of the GU system
  • mouse strains to facilitate developmental and functional studies within the GU system
  • tutorials describing GU organogenesis
  • rapid access to primary data via the GUDMAP database

The GUDMAP tools, web site and database are a public resource funded by the National Institutes of Health, USA.

GUDMAP Tutorials Download Data