Quick search:
Gene
Anatomy
Accession ID
Function
for
Login
Feedback
Home
About GUDMAP
Goals
Projects
Publications
Contacts
Positions
Funding
Events
Links
Message Board
Citing GUDMAP
Gene Expression
Query/Browse Database
Tissue Summaries
ISH Quality Control
Resources
Submission Archive
Project Protocols
Mice/Cell Lines
3D Atlas
Ontology
UQ GUDMAP - Probe Design
Web Stats
Internal
Tutorials
Overview
Urinary Development
Reproductive Development
Disease
Help
Using Database
Website
Glossary
Clinicians
Biologists
Bioinformaticians
Public
System Requirements
Expression Database
Tissue Summaries
Analysis
Annotate
Downloads
Data Source
Collections
Expression Database
Data Source
Gene
Pax2
paired box gene 2
Theiler Stage
TS27
Tissue
metanephros
Images
Image at 4x view = Global.
Image at 40x view = Outer Cortex.
Image at 40x view = Inner Cortex.
Image at 40x view = Outer Medulla.
Image at 40x view = Inner Medulla.
Image at 40x view = Renal Pelvis.
Submitters
Principal Investigator(s):
Andrew P McMahon,
Harvard University, Cambridge, MA, USA, amcmahon@med.usc.edu
Authors:
Andrew P McMahon, Jing Yu, M Todd Valerius
Submitted By:
Jing Yu and M Todd Valerius,
Harvard University, Cambridge, MA, USA, jingyu@mcb.harvard.edu
Archive ID:
31
Submission ID:
AM_090706_93
Expression Mapping
Expression Strengths Key:
Present (unspecified strength)
Present (strong)
Present (moderate)
Present (weak)
Uncertain
Not Detected
Expression Patterns Key:
Homogeneous
Graded
Regional
Spotted
Ubiquitous
Restricted
Single cell
Contains note
View annotated components as a list
Show annotation under groups
Javascript Tree Menu
A tree of annotated anatomical components will open here if you enable JavaScript in your browser.
 
 
Probe
Gene:
Symbol:
Pax2
Name:
paired box gene 2
(
MGI:97486
)
Probe ID:
MGI:3506120
(maprobe:181)
Name of cDNA:
MTF#264
Sequence ID:
X55781.1
5' primer sequence:
CGCGGATCCCAGGTACTACGAGACTGGCAGC
3' primer sequence:
TGCTCTAGATCATCAAGCCCAGGGGTCAGGG
5' primer location:
531
3' primer location:
1205
Template Sequence:
(Click to see sequence.)
Origin of Clone used to make the Probe:
cDNA
Strain:
Tissue:
Probe Type:
RNA
Type:
antisense
Labelled with:
digoxigenin
Visualisation method:
alkaline phosphatase + BM purple
 
 
Specimen
Theiler Stage:
TS27
Other Staging System:
P 0
Tissue:
metanephros
Strain:
Swiss Webster
Genotype:
Wild type
Sex:
unknown
Specimen Preparation:
section
Fixation Method:
4% paraformaldehyde
Embedding:
cryosection
Experiment Notes:
Samples are 20uM frozen sections.
Linked Publications
Linked Submissions
Acknowledgements
Jenn Hansard is acknowledged for their technical assistance on the GUDMAP project.