Quick search:
Gene
Anatomy
Accession ID
Function
for
Login
Feedback
Home
About GUDMAP
Goals
Projects
Publications
Contacts
Positions
Funding
Events
Links
Message Board
Citing GUDMAP
Gene Expression
Query/Browse Database
Tissue Summaries
ISH Quality Control
Resources
Submission Archive
Project Protocols
Mice/Cell Lines
3D Atlas
Ontology
UQ GUDMAP - Probe Design
Web Stats
Internal
Tutorials
Overview
Urinary Development
Reproductive Development
Disease
Help
Using Database
Website
Glossary
Clinicians
Biologists
Bioinformaticians
Public
System Requirements
Expression Database
Tissue Summaries
Analysis
Annotate
Downloads
Data Source
Collections
Expression Database
GUDMAP:11404
Data Source
Gene
C1qbp
complement component 1, q subcomponent binding protein
Theiler Stage
TS23
Tissue
metanephros
Images
Proximal Ureter.
Metanephros sectioned through medulla and ureter - strongest expression in cap mesenchyme.
Submitters
Principal Investigator(s):
Melissa H Little,
University of Queensland, Brisbane, Australia, m.little@imb.uq.edu.au
Authors:
Sean Grimmond, Rathi Thiagarajan, Emmanuelle Lesieur, Bree Rumballe, Melissa Little, Darrin Taylor, Han Sheng Chiu, Kylie Georgas
Submitted By:
Kylie Georgas,
University of Queensland, Brisbane, Australia, k.georgas@imb.uq.edu.au
Archive ID:
166
Submission ID:
999999138
Expression Mapping
Expression Strengths Key:
Present (unspecified strength)
Present (strong)
Present (moderate)
Present (weak)
Uncertain
Not Detected
Expression Patterns Key:
Homogeneous
Graded
Regional
Spotted
Ubiquitous
Restricted
Single cell
Contains note
View annotated components as a list
Show annotation under groups
Javascript Tree Menu
A tree of annotated anatomical components will open here if you enable JavaScript in your browser.
Probe
Gene:
Symbol:
C1qbp
Name:
complement component 1, q subcomponent binding protein
(
MGI:1194505
)
Probe ID:
maprobe:5557
Name of cDNA:
2410027C17
Sequence ID:
AK010601.1
5' primer sequence:
AACAACAGCATCCCTCCAAC
3' primer sequence:
CGATGTTAATACGACTCACTATAGGGCCAAAGGAATAGCGAATGGA
5' primer location:
414
3' primer location:
1017
Origin of Clone used to make the Probe:
Strain:
Tissue:
Probe Type:
RNA
Type:
antisense
Labelled with:
digoxigenin
Visualisation method:
alkaline phosphatase + BM purple
Lab Probe ID:
1430
Probe Notes:
Riboprobe generated from a PCR-generated DNA template. The details of the PCR protocol are in the Project Protocols under the Research menu of the website. Primers are designed to amplify a 3'UTR region of the gene of between 500-700bp. The reverse primer is linked to a T7 Polymerase promoter tag sequence.
Specimen
Theiler Stage:
TS23
Other Staging System:
15.5dpc
Tissue:
metanephros
Strain:
CD1
Genotype:
Wild type
Sex:
unknown
Specimen Preparation:
section
Fixation Method:
4% paraformaldehyde
Embedding:
paraffin
Experiment Notes:
7µm sections 4 sections examined including metanephros and proximal ureter. Experiment: SISH200607 1430 Robot SISH Slide A13 Colour development for 25hrs. Control probes Wnt4, Wnt7b and Shh on TS23 metanephros colour developed for 25hrs, 91hrs and 91hrs respectively. Expression was seen with the low level expression control Shh in this experiment therefore genes with a low level expression are likely to be detected. Imaging: BatchScan 06-07-07 Image_12.vsi.