Edinburgh Core Database Group

Capel Group

Cohn Group

Gaido Group

Jain Group

Keast Group

Lessard Group

Little Group

McMahon Group

Mendelsohn Group

Potter Group

Southard-Smith Group

Vezina Group

Editorial Office Protocols

Normalisation of cDNA microarray CHP files

CHP files are normalised by averaging values for each cDNA probe across entire datasets. Binary logarithms (log2) of these normalised values are published as heatmaps on the GUDMAP website.

heatmap

Heatmaps are currently available for the following datasets.

To display heatmaps we use the following formula:

More details on the Affymetrix platforms (MOE430, ST1) can be found here.