Report Type: Expression Report Date: 02:08PM 10/28/2004 ______________________________________________________________________ Filename: Potter#5_MOE_430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.360 Scale Factor (SF): 7.055 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 43.60 Std: 0.90 Min: 42.00 Max: 46.10 Noise: Avg: 1.90 Std: 0.05 Min: 1.70 Max: 2.00 Corner+ Avg: 48 Count: 32 Corner- Avg: 8684 Count: 32 Central- Avg: 9507 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22113 49.0% Number Absent: 22386 49.6% Number Marginal: 602 1.3% Average Signal (P): 4280.2 Average Signal (A): 62.2 Average Signal (M): 252.7 Average Signal (All): 2132.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 1109.8 P 1876.3 P 13788.2 P 5591.44 12.42 AFFX-GAPDHMUR/M32599 1202.0 P 16298.9 P 43488.8 P 20329.87 36.18 AFFX-TRANSRECMUR/X57349 6.4 A 4.4 A 148.8 P 53.20 23.21 AFFX-PYRUCARBMUR/L09192 161.8 A 143.6 A 1006.2 P 437.23 6.22 AFFX-18SRNAMUR/X00686 179.8 P 522.7 P 672.0 P 458.19 3.74 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 855.9 P 1374.2 P 786.9 P 1005.67 0.92 AFFX-BIOC 2334.9 P 3181.4 P 2758.16 1.36 AFFX-BIOD 5717.0 P 11329.2 P 8523.11 1.98 AFFX-CRE 20686.8 P 27095.4 P 23891.12 1.31 AFFX-DAP 12.5 A 30.8 A 38.3 A 27.20 3.08 AFFX-LYS 4.6 A 37.3 A 31.2 A 24.41 6.74 AFFX-PHE 7.0 A 1.4 A 56.7 A 21.69 8.15 AFFX-THR 70.9 A 25.4 A 14.5 A 36.94 0.21 AFFX-TRP 56.3 A 7.1 A 13.7 A 25.67 0.24 AFFX-R2-EC-BIOB 1457.5 P 1418.5 P 1174.5 P 1350.20 0.81 AFFX-R2-EC-BIOC 3812.0 P 4324.8 P 4068.42 1.13 AFFX-R2-EC-BIOD 13811.7 P 15060.1 P 14435.91 1.09 AFFX-R2-P1-CRE 32572.3 P 51056.6 P 41814.45 1.57 AFFX-R2-BS-DAP 35.3 A 42.6 A 7.6 A 28.52 0.22 AFFX-R2-BS-LYS 4.3 A 2.6 A 33.1 A 13.31 7.78 AFFX-R2-BS-PHE 7.6 A 4.0 A 8.4 A 6.69 1.11 AFFX-R2-BS-THR 2.6 A 14.1 A 29.6 A 15.46 11.22 ______________________________________________________________________