Report Type: Expression Report Date: 02:01PM 10/28/2004 ______________________________________________________________________ Filename: Potter#4_MOE_430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.340 Scale Factor (SF): 6.752 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 43.53 Std: 0.49 Min: 42.60 Max: 44.60 Noise: Avg: 1.86 Std: 0.05 Min: 1.80 Max: 2.00 Corner+ Avg: 53 Count: 32 Corner- Avg: 10306 Count: 32 Central- Avg: 10696 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 21727 48.2% Number Absent: 22806 50.6% Number Marginal: 568 1.3% Average Signal (P): 4541.2 Average Signal (A): 56.6 Average Signal (M): 188.6 Average Signal (All): 2218.7 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 1937.0 P 3539.0 P 21152.0 P 8875.98 10.92 AFFX-GAPDHMUR/M32599 8746.3 P 35765.4 P 57113.5 P 33875.05 6.53 AFFX-TRANSRECMUR/X57349 5.3 A 5.9 A 504.3 P 171.85 95.52 AFFX-PYRUCARBMUR/L09192 121.8 A 164.6 A 713.3 P 333.22 5.85 AFFX-18SRNAMUR/X00686 1790.3 P 4811.1 P 9430.1 P 5343.82 5.27 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1060.4 P 2014.2 P 1230.8 P 1435.15 1.16 AFFX-BIOC 3911.7 P 4410.4 P 4161.03 1.13 AFFX-BIOD 7982.5 P 14830.4 P 11406.46 1.86 AFFX-CRE 29825.8 P 35824.9 P 32825.35 1.20 AFFX-DAP 31.7 A 31.4 A 6.9 A 23.31 0.22 AFFX-LYS 4.4 A 7.7 A 4.4 A 5.50 1.01 AFFX-PHE 5.1 A 4.6 A 57.7 A 22.44 11.41 AFFX-THR 43.5 A 25.4 A 11.2 A 26.69 0.26 AFFX-TRP 47.4 A 45.0 A 3.2 A 31.87 0.07 AFFX-R2-EC-BIOB 1873.9 P 1843.5 P 1474.1 P 1730.48 0.79 AFFX-R2-EC-BIOC 4163.5 P 5067.5 P 4615.49 1.22 AFFX-R2-EC-BIOD 16973.8 P 17247.2 P 17110.54 1.02 AFFX-R2-P1-CRE 39590.6 P 54640.2 P 47115.41 1.38 AFFX-R2-BS-DAP 27.8 A 2.8 A 27.4 A 19.31 0.98 AFFX-R2-BS-LYS 1.2 A 4.0 A 58.0 A 21.08 48.02 AFFX-R2-BS-PHE 3.8 A 2.7 A 12.7 A 6.39 3.37 AFFX-R2-BS-THR 51.1 P 97.0 A 47.2 A 65.09 0.92 ______________________________________________________________________