Report Type: Expression Report Date: 03:44PM 07/15/2005 ______________________________________________________________________ Filename: 3_7_12_05_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.130 Scale Factor (SF): 9.411 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 39.70 Std: 0.33 Min: 38.60 Max: 40.00 Noise: Avg: 1.50 Std: 0.03 Min: 1.40 Max: 1.60 Corner+ Avg: 73 Count: 32 Corner- Avg: 3847 Count: 32 Central- Avg: 4542 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 19573 43.4% Number Absent: 24908 55.2% Number Marginal: 620 1.4% Average Signal (P): 5412.4 Average Signal (A): 80.3 Average Signal (M): 260.7 Average Signal (All): 2396.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 691.2 P 1421.1 P 15032.8 P 5715.03 21.75 AFFX-GAPDHMUR/M32599 1757.6 P 9831.1 P 41457.7 P 17682.15 23.59 AFFX-TRANSRECMUR/X57349 52.8 A 4.4 A 119.7 P 58.98 2.27 AFFX-PYRUCARBMUR/L09192 126.1 A 253.5 A 1902.4 P 760.66 15.09 AFFX-18SRNAMUR/X00686 3498.8 P 6956.6 P 9420.0 P 6625.15 2.69 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2008.9 P 3319.5 P 1822.2 P 2383.53 0.91 AFFX-BIOC 4837.7 P 6358.3 P 5597.97 1.31 AFFX-BIOD 9793.0 P 21487.0 P 15640.01 2.19 AFFX-CRE 54525.9 P 62349.3 P 58437.61 1.14 AFFX-DAP 46.1 A 14.6 A 47.7 A 36.16 1.04 AFFX-LYS 29.4 A 14.1 A 11.0 A 18.17 0.37 AFFX-PHE 9.5 A 2.1 A 102.5 A 38.02 10.82 AFFX-THR 45.0 A 21.5 A 11.3 A 25.94 0.25 AFFX-TRP 77.0 A 33.3 A 6.6 A 38.96 0.09 AFFX-R2-EC-BIOB 3230.3 P 2959.8 P 2943.4 P 3044.49 0.91 AFFX-R2-EC-BIOC 7263.4 P 8508.8 P 7886.06 1.17 AFFX-R2-EC-BIOD 27486.6 P 29127.6 P 28307.14 1.06 AFFX-R2-P1-CRE 68749.4 P 90028.0 P 79388.68 1.31 AFFX-R2-BS-DAP 12.1 A 30.2 A 1.8 A 14.72 0.15 AFFX-R2-BS-LYS 1.2 A 6.8 A 85.1 P 31.07 68.28 AFFX-R2-BS-PHE 19.8 A 12.0 A 58.4 A 30.06 2.94 AFFX-R2-BS-THR 46.3 A 23.4 A 15.0 A 28.23 0.32 ______________________________________________________________________