Report Type: Expression Report Date: 11:16AM 01/10/2006 ______________________________________________________________________ Filename: Steve2_1_6_06_MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.290 Scale Factor (SF): 11.662 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 38.45 Std: 0.34 Min: 37.90 Max: 39.60 Noise: Avg: 1.94 Std: 0.06 Min: 1.80 Max: 2.10 Corner+ Avg: 84 Count: 32 Corner- Avg: 14669 Count: 32 Central- Avg: 18109 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 19378 43.0% Number Absent: 25037 55.5% Number Marginal: 686 1.5% Average Signal (P): 5865.6 Average Signal (A): 156.3 Average Signal (M): 474.7 Average Signal (All): 2614.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 12273.8 P 29174.4 P 47962.5 P 29803.60 3.91 AFFX-GapdhMur/M32599 635.3 P 2958.4 P 15027.4 P 6207.03 23.65 AFFX-TransRecMur/X57349 499.7 P 21.2 A 491.2 P 337.38 0.98 AFFX-PyruCarbMur/L09192 212.4 A 468.7 A 828.7 P 503.26 3.90 AFFX-18SRNAMur/X00686 63761.7 P 157374.4 P 131554.6 P 117563.57 2.06 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 4327.8 P 7455.7 P 4686.8 P 5490.11 1.08 AFFX-BioC 9418.8 P 10998.4 P 10208.59 1.17 AFFX-BioD 19038.7 P 40755.0 P 29896.82 2.14 AFFX-Cre 111562.8 P 124102.3 P 117832.53 1.11 AFFX-Dap 125.9 A 124.8 A 47.6 A 99.43 0.38 AFFX-Lys 7.1 A 66.9 A 46.0 A 39.99 6.47 AFFX-Phe 8.1 A 8.6 A 115.0 A 43.90 14.18 AFFX-Thr 129.3 A 98.9 A 71.1 A 99.76 0.55 AFFX-Trp 111.3 P 7.3 A 61.3 A 59.97 0.55 AFFX-r2-Ec-bioB 7670.7 P 7150.1 P 6114.0 P 6978.29 0.80 AFFX-r2-Ec-bioC 15856.8 P 17014.2 P 16435.49 1.07 AFFX-r2-Ec-bioD 47489.5 P 57852.3 P 52670.91 1.22 AFFX-r2-P1-cre 139273.0 P 172465.9 P 155869.41 1.24 AFFX-r2-Bs-dap 36.0 A 69.1 A 35.2 A 46.76 0.98 AFFX-r2-Bs-lys 11.9 A 47.0 A 26.1 A 28.34 2.20 AFFX-r2-Bs-phe 7.2 A 33.7 A 141.8 A 60.92 19.59 AFFX-r2-Bs-thr 5.0 A 71.4 A 128.4 A 68.27 25.56 ______________________________________________________________________