Report Type: Expression Report Date: 12:34PM 10/18/2005 ______________________________________________________________________ Filename: Potter_3_10_6_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.940 Scale Factor (SF): 4.327 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 60.53 Std: 0.98 Min: 56.10 Max: 62.30 Noise: Avg: 3.05 Std: 0.12 Min: 2.80 Max: 3.60 Corner+ Avg: 103 Count: 32 Corner- Avg: 17717 Count: 32 Central- Avg: 18332 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 21598 47.9% Number Absent: 22930 50.8% Number Marginal: 573 1.3% Average Signal (P): 4508.5 Average Signal (A): 77.2 Average Signal (M): 278.3 Average Signal (All): 2201.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 5449.8 P 15381.6 P 35380.2 P 18737.19 6.49 AFFX-GapdhMur/M32599 1464.7 P 7935.4 P 27393.6 P 12264.59 18.70 AFFX-TransRecMur/X57349 593.9 P 69.8 P 1107.4 P 590.38 1.86 AFFX-PyruCarbMur/L09192 300.8 A 266.0 A 691.7 P 419.49 2.30 AFFX-18SRNAMur/X00686 42166.3 P 66055.3 P 62786.6 P 57002.74 1.49 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1316.1 P 2194.6 P 1346.4 P 1619.02 1.02 AFFX-BioC 2824.0 P 4173.3 P 3498.64 1.48 AFFX-BioD 7672.7 P 15179.2 P 11425.98 1.98 AFFX-Cre 41541.6 P 47632.0 P 44586.79 1.15 AFFX-Dap 36.0 A 38.4 A 6.4 A 26.95 0.18 AFFX-Lys 3.7 A 8.1 A 22.7 A 11.51 6.06 AFFX-Phe 3.9 A 4.5 A 146.6 A 51.70 37.26 AFFX-Thr 24.0 A 25.4 A 7.5 A 18.99 0.31 AFFX-Trp 9.5 A 10.4 A 23.4 A 14.44 2.47 AFFX-r2-Ec-bioB 2489.1 P 2308.2 P 1945.0 P 2247.43 0.78 AFFX-r2-Ec-bioC 4735.8 P 5382.7 P 5059.24 1.14 AFFX-r2-Ec-bioD 18772.4 P 22780.9 P 20776.65 1.21 AFFX-r2-P1-cre 50637.2 P 64515.7 P 57576.46 1.27 AFFX-r2-Bs-dap 20.5 A 1.4 A 7.6 A 9.85 0.37 AFFX-r2-Bs-lys 30.0 A 25.4 A 57.3 P 37.60 1.91 AFFX-r2-Bs-phe 2.6 A 3.8 A 122.6 A 42.99 47.58 AFFX-r2-Bs-thr 3.6 A 20.3 A 12.8 A 12.23 3.58 ______________________________________________________________________