Report Type: Expression Report Date: 12:34PM 10/18/2005 ______________________________________________________________________ Filename: Potter_2_10_6_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.840 Scale Factor (SF): 12.249 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 53.51 Std: 0.50 Min: 52.00 Max: 54.70 Noise: Avg: 2.66 Std: 0.08 Min: 2.50 Max: 2.90 Corner+ Avg: 99 Count: 32 Corner- Avg: 17802 Count: 32 Central- Avg: 18569 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 18695 41.5% Number Absent: 25814 57.2% Number Marginal: 592 1.3% Average Signal (P): 5652.0 Average Signal (A): 154.0 Average Signal (M): 544.7 Average Signal (All): 2438.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 9306.0 P 23909.8 P 59355.3 P 30857.05 6.38 AFFX-GapdhMur/M32599 822.1 P 5563.3 P 21701.3 P 9362.22 26.40 AFFX-TransRecMur/X57349 453.0 P 251.5 P 268.0 P 324.17 0.59 AFFX-PyruCarbMur/L09192 418.4 A 720.6 P 2769.4 P 1302.82 6.62 AFFX-18SRNAMur/X00686 76885.9 P 155338.6 P 143060.6 P 125095.04 1.86 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 4990.9 P 9990.3 P 5679.0 P 6886.73 1.14 AFFX-BioC 13567.4 P 14188.3 P 13877.85 1.05 AFFX-BioD 26845.4 P 54499.0 P 40672.22 2.03 AFFX-Cre 128040.2 P 142364.0 P 135202.06 1.11 AFFX-Dap 6.2 A 60.8 A 17.3 A 28.11 2.80 AFFX-Lys 30.0 A 22.4 A 77.6 A 43.33 2.59 AFFX-Phe 8.4 A 19.1 A 362.1 P 129.91 42.91 AFFX-Thr 80.9 A 56.0 A 11.5 A 49.43 0.14 AFFX-Trp 42.1 A 6.4 A 15.0 A 21.18 0.36 AFFX-r2-Ec-bioB 9872.5 P 9735.9 P 7502.5 P 9036.96 0.76 AFFX-r2-Ec-bioC 19713.4 P 19981.0 P 19847.20 1.01 AFFX-r2-Ec-bioD 59852.2 P 75376.3 P 67614.27 1.26 AFFX-r2-P1-cre 154657.5 P 189531.0 P 172094.25 1.23 AFFX-r2-Bs-dap 102.9 A 10.1 A 31.0 A 47.99 0.30 AFFX-r2-Bs-lys 107.4 A 11.6 A 130.8 A 83.28 1.22 AFFX-r2-Bs-phe 64.6 A 10.3 A 138.6 A 71.15 2.15 AFFX-r2-Bs-thr 84.2 A 230.0 A 61.0 A 125.08 0.72 ______________________________________________________________________