Report Type: Expression Report Date: 03:01PM 11/10/2005 ______________________________________________________________________ Filename: Potter_1_11_8_05_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.800 Scale Factor (SF): 6.003 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 55.30 Std: 0.63 Min: 52.70 Max: 56.50 Noise: Avg: 2.90 Std: 0.09 Min: 2.80 Max: 3.30 Corner+ Avg: 71 Count: 32 Corner- Avg: 12523 Count: 32 Central- Avg: 14434 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23321 51.7% Number Absent: 21026 46.6% Number Marginal: 754 1.7% Average Signal (P): 4361.2 Average Signal (A): 112.5 Average Signal (M): 306.5 Average Signal (All): 2312.7 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 12965.7 P 24206.1 P 46733.2 P 27968.30 3.60 AFFX-GapdhMur/M32599 1079.5 P 10014.7 P 36790.1 P 15961.45 34.08 AFFX-TransRecMur/X57349 507.6 P 231.3 P 1047.3 P 595.41 2.06 AFFX-PyruCarbMur/L09192 311.1 A 194.9 A 675.3 P 393.78 2.17 AFFX-18SRNAMur/X00686 60666.8 P 87749.3 P 81994.6 P 76803.56 1.35 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1355.0 P 2425.0 P 1336.6 P 1705.52 0.99 AFFX-BioC 2976.4 P 4123.6 P 3549.99 1.39 AFFX-BioD 6732.7 P 16337.3 P 11535.00 2.43 AFFX-Cre 43512.4 P 49559.1 P 46535.73 1.14 AFFX-Dap 37.9 A 48.7 A 12.3 A 32.97 0.33 AFFX-Lys 36.4 A 86.9 A 6.7 A 43.34 0.18 AFFX-Phe 10.9 A 54.7 A 309.3 A 124.94 28.43 AFFX-Thr 125.2 P 63.4 A 23.6 A 70.75 0.19 AFFX-Trp 90.6 A 6.5 A 8.1 A 35.05 0.09 AFFX-r2-Ec-bioB 2544.9 P 2201.9 P 2293.2 P 2346.64 0.90 AFFX-r2-Ec-bioC 5214.1 P 6248.0 P 5731.05 1.20 AFFX-r2-Ec-bioD 18783.0 P 24572.7 P 21677.83 1.31 AFFX-r2-P1-cre 59996.0 P 80829.4 P 70412.73 1.35 AFFX-r2-Bs-dap 44.4 A 1.4 A 5.3 A 17.02 0.12 AFFX-r2-Bs-lys 54.5 A 19.2 A 62.0 A 45.23 1.14 AFFX-r2-Bs-phe 30.0 A 2.4 A 130.3 A 54.25 4.34 AFFX-r2-Bs-thr 70.4 M 23.1 A 10.4 A 34.62 0.15 ______________________________________________________________________