Report Type: Expression Report Date: 12:33PM 10/18/2005 ______________________________________________________________________ Filename: Potter_1_10_6_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.690 Scale Factor (SF): 7.094 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 50.37 Std: 0.57 Min: 49.00 Max: 51.90 Noise: Avg: 2.64 Std: 0.08 Min: 2.50 Max: 2.90 Corner+ Avg: 107 Count: 32 Corner- Avg: 16764 Count: 32 Central- Avg: 17870 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 19521 43.3% Number Absent: 24967 55.4% Number Marginal: 613 1.4% Average Signal (P): 5334.5 Average Signal (A): 103.8 Average Signal (M): 384.1 Average Signal (All): 2371.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 4299.6 P 10104.4 P 33688.2 P 16030.75 7.84 AFFX-GapdhMur/M32599 468.1 P 4249.3 P 26182.2 P 10299.85 55.93 AFFX-TransRecMur/X57349 94.0 A 100.9 A 1072.4 P 422.41 11.41 AFFX-PyruCarbMur/L09192 212.0 A 235.5 A 499.6 P 315.72 2.36 AFFX-18SRNAMur/X00686 35737.5 P 87019.9 P 86848.1 P 69868.48 2.43 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2546.4 P 3758.8 P 2478.8 P 2927.99 0.97 AFFX-BioC 4951.6 P 6193.0 P 5572.30 1.25 AFFX-BioD 11128.2 P 24899.6 P 18013.88 2.24 AFFX-Cre 62640.4 P 69997.8 P 66319.09 1.12 AFFX-Dap 60.2 A 121.5 A 84.2 A 88.62 1.40 AFFX-Lys 45.9 A 12.3 A 60.3 A 39.49 1.31 AFFX-Phe 4.8 A 3.9 A 82.1 A 30.24 17.25 AFFX-Thr 65.0 A 70.1 A 8.0 A 47.69 0.12 AFFX-Trp 114.5 A 5.3 A 4.6 A 41.45 0.04 AFFX-r2-Ec-bioB 4322.0 P 4541.0 P 3560.8 P 4141.25 0.82 AFFX-r2-Ec-bioC 8351.1 P 9729.9 P 9040.52 1.17 AFFX-r2-Ec-bioD 30486.8 P 37702.4 P 34094.60 1.24 AFFX-r2-P1-cre 79545.1 P 99627.2 P 89586.15 1.25 AFFX-r2-Bs-dap 18.5 A 1.7 A 4.8 A 8.32 0.26 AFFX-r2-Bs-lys 2.2 A 52.6 A 97.7 P 50.86 44.32 AFFX-r2-Bs-phe 61.2 A 6.1 A 192.4 A 86.55 3.14 AFFX-r2-Bs-thr 34.4 A 18.3 A 36.6 A 29.75 1.06 ______________________________________________________________________