Report Type: Expression Report Date: 02:57PM 12/13/2004 ______________________________________________________________________ Filename: #7Potter_11_18.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.800 Scale Factor (SF): 29.892 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 30.61 Std: 0.26 Min: 30.40 Max: 31.30 Noise: Avg: 0.90 Std: 0.03 Min: 0.80 Max: 1.00 Corner+ Avg: 42 Count: 32 Corner- Avg: 8990 Count: 32 Central- Avg: 8995 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 18554 41.1% Number Absent: 25852 57.3% Number Marginal: 695 1.5% Average Signal (P): 7266.6 Average Signal (A): 120.2 Average Signal (M): 440.7 Average Signal (All): 3065.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 493.7 P 1291.1 P 11917.3 P 4567.36 24.14 AFFX-GAPDHMUR/M32599 1661.8 P 11218.5 P 80922.9 P 31267.71 48.70 AFFX-TRANSRECMUR/X57349 77.4 A 26.2 A 116.2 P 73.25 1.50 AFFX-PYRUCARBMUR/L09192 59.7 A 349.4 A 11250.7 P 3886.58 188.48 AFFX-18SRNAMUR/X00686 5442.2 P 14192.8 P 11503.3 P 10379.44 2.11 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 6369.3 P 10789.7 P 7267.5 P 8142.18 1.14 AFFX-BIOC 12145.0 P 13601.4 P 12873.19 1.12 AFFX-BIOD 44029.6 P 72803.7 P 58416.67 1.65 AFFX-CRE 165923.6 P 165127.0 P 165525.31 1.00 AFFX-DAP 30.1 A 164.2 M 50.6 A 81.62 1.68 AFFX-LYS 3.1 A 14.7 A 13.0 A 10.30 4.15 AFFX-PHE 5.8 A 15.1 A 55.9 A 25.60 9.57 AFFX-THR 150.0 A 35.7 A 31.2 A 72.29 0.21 AFFX-TRP 111.4 A 12.1 A 37.3 A 53.63 0.33 AFFX-R2-EC-BIOB 10439.8 P 9715.2 P 8667.5 P 9607.48 0.83 AFFX-R2-EC-BIOC 17628.9 P 17141.2 P 17385.04 0.97 AFFX-R2-EC-BIOD 88943.2 P 104991.2 P 96967.20 1.18 AFFX-R2-P1-CRE 201287.0 P 259454.5 P 230370.75 1.29 AFFX-R2-BS-DAP 99.6 A 32.3 A 70.6 A 67.52 0.71 AFFX-R2-BS-LYS 77.3 A 5.0 A 5.9 A 29.40 0.08 AFFX-R2-BS-PHE 25.9 A 16.1 A 53.9 A 31.94 2.08 AFFX-R2-BS-THR 104.8 A 56.7 A 20.9 A 60.80 0.20 ______________________________________________________________________