Report Type: Expression Report Date: 03:03PM 11/10/2005 ______________________________________________________________________ Filename: Potter_4_11_8_05_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.600 Scale Factor (SF): 4.931 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 47.17 Std: 0.64 Min: 45.60 Max: 48.50 Noise: Avg: 2.83 Std: 0.09 Min: 2.70 Max: 3.10 Corner+ Avg: 126 Count: 32 Corner- Avg: 14729 Count: 32 Central- Avg: 16469 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 24651 54.7% Number Absent: 19733 43.8% Number Marginal: 717 1.6% Average Signal (P): 3988.6 Average Signal (A): 117.0 Average Signal (M): 347.8 Average Signal (All): 2236.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 17861.4 P 28397.6 P 48223.8 P 31494.29 2.70 AFFX-GapdhMur/M32599 1154.4 P 8503.4 P 33008.5 P 14222.09 28.59 AFFX-TransRecMur/X57349 899.6 P 361.3 P 1187.5 P 816.14 1.32 AFFX-PyruCarbMur/L09192 364.4 P 226.1 P 1034.0 P 541.50 2.84 AFFX-18SRNAMur/X00686 67721.4 P 77510.3 P 74232.8 P 73154.84 1.10 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1520.6 P 2394.5 P 1618.1 P 1844.40 1.06 AFFX-BioC 3370.3 P 5381.6 P 4375.98 1.60 AFFX-BioD 7873.8 P 17656.2 P 12764.98 2.24 AFFX-Cre 45929.6 P 51602.1 P 48765.85 1.12 AFFX-Dap 53.5 A 32.8 A 7.3 A 31.21 0.14 AFFX-Lys 4.2 A 40.7 A 29.0 A 24.64 6.83 AFFX-Phe 11.4 A 1.6 A 171.3 A 61.42 15.08 AFFX-Thr 62.6 A 14.8 A 25.3 A 34.25 0.41 AFFX-Trp 98.1 A 3.3 A 5.3 A 35.57 0.05 AFFX-r2-Ec-bioB 3019.2 P 2926.1 P 2516.8 P 2820.72 0.83 AFFX-r2-Ec-bioC 5316.6 P 6571.6 P 5944.12 1.24 AFFX-r2-Ec-bioD 19440.7 P 25422.6 P 22431.62 1.31 AFFX-r2-P1-cre 53861.1 P 71644.7 P 62752.91 1.33 AFFX-r2-Bs-dap 19.1 A 39.1 A 2.6 A 20.25 0.13 AFFX-r2-Bs-lys 31.4 A 46.9 A 26.6 A 34.97 0.85 AFFX-r2-Bs-phe 73.0 A 10.1 A 29.4 P 37.53 0.40 AFFX-r2-Bs-thr 43.5 A 135.2 A 16.6 A 65.09 0.38 ______________________________________________________________________