Report Type: Expression Report Date: 12:41PM 11/23/2005 ______________________________________________________________________ Filename: Potter_3_11_21_05_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.940 Scale Factor (SF): 4.855 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 58.94 Std: 0.60 Min: 57.40 Max: 60.50 Noise: Avg: 3.27 Std: 0.08 Min: 3.10 Max: 3.60 Corner+ Avg: 79 Count: 32 Corner- Avg: 6150 Count: 32 Central- Avg: 6088 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 24863 55.1% Number Absent: 19566 43.4% Number Marginal: 672 1.5% Average Signal (P): 3771.6 Average Signal (A): 115.6 Average Signal (M): 362.5 Average Signal (All): 2134.7 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 13076.4 P 24243.8 P 41147.5 P 26155.92 3.15 AFFX-GapdhMur/M32599 1176.6 P 7943.7 P 30472.3 P 13197.53 25.90 AFFX-TransRecMur/X57349 1066.2 P 500.8 P 1750.1 P 1105.70 1.64 AFFX-PyruCarbMur/L09192 358.5 A 278.2 A 823.8 P 486.84 2.30 AFFX-18SRNAMur/X00686 48442.2 P 65125.6 P 61771.8 P 58446.54 1.28 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 850.2 P 1403.2 P 830.3 P 1027.90 0.98 AFFX-BioC 1854.7 P 3307.5 P 2581.09 1.78 AFFX-BioD 4506.7 P 10474.9 P 7490.82 2.32 AFFX-Cre 29193.9 P 38958.4 P 34076.13 1.33 AFFX-Dap 41.1 A 45.9 A 56.0 A 47.66 1.36 AFFX-Lys 2.5 A 3.9 A 29.4 A 11.94 11.62 AFFX-Phe 7.5 A 3.0 A 237.2 P 82.56 31.51 AFFX-Thr 35.5 A 30.8 A 8.8 A 25.02 0.25 AFFX-Trp 73.7 A 20.7 A 14.3 A 36.26 0.19 AFFX-r2-Ec-bioB 1543.6 P 1527.1 P 1529.6 P 1533.45 0.99 AFFX-r2-Ec-bioC 3164.4 P 4181.3 P 3672.83 1.32 AFFX-r2-Ec-bioD 11655.7 P 15452.9 P 13554.32 1.33 AFFX-r2-P1-cre 43398.0 P 55784.5 P 49591.27 1.29 AFFX-r2-Bs-dap 34.1 A 6.7 A 36.3 A 25.70 1.06 AFFX-r2-Bs-lys 28.3 A 15.0 A 52.8 A 32.04 1.87 AFFX-r2-Bs-phe 20.9 A 30.3 A 96.5 A 49.24 4.61 AFFX-r2-Bs-thr 59.7 A 91.5 A 13.4 A 54.88 0.23 ______________________________________________________________________