Report Type: Expression Report Date: 12:42PM 11/23/2005 ______________________________________________________________________ Filename: Potter_4_11_21_05_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.920 Scale Factor (SF): 6.142 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 59.79 Std: 0.64 Min: 57.90 Max: 61.10 Noise: Avg: 3.18 Std: 0.14 Min: 2.70 Max: 3.70 Corner+ Avg: 68 Count: 32 Corner- Avg: 6575 Count: 32 Central- Avg: 7472 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23490 52.1% Number Absent: 20867 46.3% Number Marginal: 744 1.6% Average Signal (P): 3984.8 Average Signal (A): 148.1 Average Signal (M): 440.7 Average Signal (All): 2151.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 17144.4 P 27742.2 P 43623.0 P 29503.20 2.54 AFFX-GapdhMur/M32599 903.0 P 6711.0 P 19430.7 P 9014.90 21.52 AFFX-TransRecMur/X57349 2060.2 P 1020.8 P 2925.0 P 2001.99 1.42 AFFX-PyruCarbMur/L09192 555.9 A 493.7 P 547.1 P 532.23 0.98 AFFX-18SRNAMur/X00686 57821.3 P 78530.5 P 73038.2 P 69796.66 1.26 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1096.2 P 1917.0 P 1041.8 P 1351.68 0.95 AFFX-BioC 2425.9 P 3685.5 P 3055.66 1.52 AFFX-BioD 5940.1 P 13202.0 P 9571.05 2.22 AFFX-Cre 37460.9 P 44535.4 P 40998.16 1.19 AFFX-Dap 37.8 A 11.6 A 19.9 A 23.10 0.53 AFFX-Lys 7.6 A 77.7 A 6.4 A 30.57 0.85 AFFX-Phe 10.8 A 3.1 A 191.0 A 68.32 17.70 AFFX-Thr 79.2 A 33.5 A 12.4 A 41.71 0.16 AFFX-Trp 127.1 A 58.6 A 76.5 A 87.42 0.60 AFFX-r2-Ec-bioB 1967.6 P 1900.0 P 1844.6 P 1904.06 0.94 AFFX-r2-Ec-bioC 4566.5 P 5225.6 P 4896.04 1.14 AFFX-r2-Ec-bioD 14660.7 P 20018.7 P 17339.70 1.37 AFFX-r2-P1-cre 53188.0 P 66028.7 P 59608.35 1.24 AFFX-r2-Bs-dap 49.2 A 15.9 A 8.0 A 24.38 0.16 AFFX-r2-Bs-lys 31.8 A 5.6 A 61.4 A 32.95 1.93 AFFX-r2-Bs-phe 3.1 A 22.5 A 156.7 A 60.76 50.60 AFFX-r2-Bs-thr 51.9 A 130.9 A 45.4 A 76.07 0.88 ______________________________________________________________________