Report Type: Expression Report Date: 03:02PM 11/10/2005 ______________________________________________________________________ Filename: Potter_2_11_8_05_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.640 Scale Factor (SF): 5.830 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 51.19 Std: 0.54 Min: 48.60 Max: 52.10 Noise: Avg: 2.70 Std: 0.09 Min: 2.60 Max: 3.00 Corner+ Avg: 93 Count: 32 Corner- Avg: 14260 Count: 32 Central- Avg: 14746 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23881 53.0% Number Absent: 20542 45.5% Number Marginal: 678 1.5% Average Signal (P): 4092.2 Average Signal (A): 113.6 Average Signal (M): 441.9 Average Signal (All): 2225.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 14673.3 P 24520.2 P 44119.5 P 27771.00 3.01 AFFX-GapdhMur/M32599 703.2 P 6290.9 P 20347.7 P 9113.95 28.93 AFFX-TransRecMur/X57349 2057.1 P 668.3 P 2242.9 P 1656.11 1.09 AFFX-PyruCarbMur/L09192 271.9 A 180.3 A 1036.3 P 496.20 3.81 AFFX-18SRNAMur/X00686 69102.6 P 85030.1 P 83444.7 P 79192.48 1.21 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1597.1 P 2659.9 P 1668.8 P 1975.23 1.04 AFFX-BioC 3482.7 P 5425.2 P 4453.97 1.56 AFFX-BioD 8346.5 P 18986.9 P 13666.69 2.27 AFFX-Cre 50110.9 P 61484.4 P 55797.66 1.23 AFFX-Dap 47.4 A 11.2 A 15.0 A 24.53 0.32 AFFX-Lys 20.1 A 10.5 A 5.2 A 11.95 0.26 AFFX-Phe 9.0 A 4.4 A 168.0 A 60.46 18.61 AFFX-Thr 63.7 A 37.3 A 14.7 A 38.55 0.23 AFFX-Trp 50.0 A 5.7 A 3.6 A 19.77 0.07 AFFX-r2-Ec-bioB 2851.0 P 2820.4 P 2564.9 P 2745.44 0.90 AFFX-r2-Ec-bioC 5738.2 P 7276.1 P 6507.15 1.27 AFFX-r2-Ec-bioD 21236.3 P 28159.3 P 24697.85 1.33 AFFX-r2-P1-cre 63813.6 P 82956.2 P 73384.87 1.30 AFFX-r2-Bs-dap 14.1 A 2.2 A 10.9 A 9.08 0.77 AFFX-r2-Bs-lys 21.5 A 13.1 A 5.7 A 13.42 0.26 AFFX-r2-Bs-phe 29.2 A 3.1 A 54.3 A 28.85 1.86 AFFX-r2-Bs-thr 54.3 A 31.1 A 7.9 A 31.11 0.14 ______________________________________________________________________