Report Type: Expression Report Date: 01:01PM 04/26/2006 ______________________________________________________________________ Filename: Potter_5_4_11_06_MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.630 Scale Factor (SF): 16.486 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 45.09 Std: 0.55 Min: 44.00 Max: 46.70 Noise: Avg: 1.93 Std: 0.07 Min: 1.80 Max: 2.10 Corner+ Avg: 50 Count: 32 Corner- Avg: 4232 Count: 32 Central- Avg: 4795 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 19810 43.9% Number Absent: 24612 54.6% Number Marginal: 679 1.5% Average Signal (P): 5873.0 Average Signal (A): 138.1 Average Signal (M): 469.9 Average Signal (All): 2662.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 19937.3 P 43469.0 P 82065.8 P 48490.70 4.12 AFFX-GapdhMur/M32599 645.5 P 1855.4 P 5577.6 P 2692.86 8.64 AFFX-TransRecMur/X57349 132.0 A 19.3 A 413.8 P 188.37 3.13 AFFX-PyruCarbMur/L09192 406.8 A 414.3 A 832.3 P 551.11 2.05 AFFX-18SRNAMur/X00686 98437.4 P 209697.1 P 108126.0 P 138753.50 1.10 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 7625.6 P 13648.2 P 7873.6 P 9715.79 1.03 AFFX-BioC 19056.3 P 21321.8 P 20189.04 1.12 AFFX-BioD 45711.6 P 69655.7 P 57683.63 1.52 AFFX-Cre 181262.9 P 191655.1 P 186459.00 1.06 AFFX-Dap 12.3 A 62.5 A 18.9 A 31.25 1.53 AFFX-Lys 10.0 A 20.2 A 32.4 A 20.88 3.24 AFFX-Phe 27.5 A 7.3 A 156.7 A 63.82 5.69 AFFX-Thr 50.7 A 13.1 A 14.6 A 26.11 0.29 AFFX-Trp 66.1 A 14.6 A 11.3 A 30.69 0.17 AFFX-r2-Ec-bioB 11877.7 P 12656.5 P 11198.1 P 11910.76 0.94 AFFX-r2-Ec-bioC 25220.0 P 27176.7 P 26198.35 1.08 AFFX-r2-Ec-bioD 87172.2 P 113353.4 P 100262.83 1.30 AFFX-r2-P1-cre 179784.4 P 229558.2 P 204671.28 1.28 AFFX-r2-Bs-dap 19.5 A 29.6 A 65.5 A 38.22 3.36 AFFX-r2-Bs-lys 76.3 A 159.2 A 20.9 A 85.47 0.27 AFFX-r2-Bs-phe 12.0 A 4.4 A 166.9 A 61.09 13.90 AFFX-r2-Bs-thr 95.6 A 236.4 A 284.4 A 205.46 2.98 ______________________________________________________________________