Report Type: Expression Report Date: 12:34PM 10/18/2005 ______________________________________________________________________ Filename: Potter_4_10_6_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.540 Scale Factor (SF): 28.465 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 45.56 Std: 0.34 Min: 44.70 Max: 46.40 Noise: Avg: 1.98 Std: 0.04 Min: 1.90 Max: 2.10 Corner+ Avg: 86 Count: 32 Corner- Avg: 17175 Count: 32 Central- Avg: 18376 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 15646 34.7% Number Absent: 28825 63.9% Number Marginal: 630 1.4% Average Signal (P): 8045.2 Average Signal (A): 216.4 Average Signal (M): 1312.0 Average Signal (All): 2947.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 9864.7 P 20152.5 P 58690.5 P 29569.22 5.95 AFFX-GapdhMur/M32599 852.6 P 5354.1 P 27053.5 P 11086.75 31.73 AFFX-TransRecMur/X57349 770.7 P 197.3 A 397.6 P 455.19 0.52 AFFX-PyruCarbMur/L09192 296.3 A 386.7 A 1997.3 P 893.43 6.74 AFFX-18SRNAMur/X00686 243113.5 P 396723.3 P 392549.2 P 344128.66 1.61 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 16785.5 P 30935.3 P 21582.5 P 23101.10 1.29 AFFX-BioC 41082.0 P 40108.5 P 40595.30 0.98 AFFX-BioD 83740.9 P 144032.0 P 113886.48 1.72 AFFX-Cre 342331.3 P 352620.6 P 347475.94 1.03 AFFX-Dap 74.8 A 274.6 A 11.6 A 120.31 0.15 AFFX-Lys 106.8 A 124.3 A 160.3 A 130.46 1.50 AFFX-Phe 33.4 A 6.6 A 509.7 A 183.20 15.27 AFFX-Thr 32.1 A 131.4 A 30.8 A 64.77 0.96 AFFX-Trp 48.2 A 15.9 A 56.9 A 40.37 1.18 AFFX-r2-Ec-bioB 32377.6 P 31679.6 P 24482.7 P 29513.29 0.76 AFFX-r2-Ec-bioC 57649.7 P 65051.2 P 61350.43 1.13 AFFX-r2-Ec-bioD 156319.3 P 207729.1 P 182024.19 1.33 AFFX-r2-P1-cre 380157.5 P 452166.1 P 416161.75 1.19 AFFX-r2-Bs-dap 150.8 A 69.3 A 120.9 A 113.69 0.80 AFFX-r2-Bs-lys 15.6 A 120.4 A 264.7 A 133.59 16.98 AFFX-r2-Bs-phe 14.1 A 86.4 A 17.0 A 39.14 1.21 AFFX-r2-Bs-thr 261.3 P 71.8 A 11.8 A 114.94 0.05 ______________________________________________________________________