Report Type: Expression Report Date: 12:59PM 04/26/2006 ______________________________________________________________________ Filename: Potter_3_4_11_06_MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.130 Scale Factor (SF): 9.512 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 38.17 Std: 0.31 Min: 36.80 Max: 38.80 Noise: Avg: 1.61 Std: 0.04 Min: 1.50 Max: 1.70 Corner+ Avg: 41 Count: 32 Corner- Avg: 4079 Count: 32 Central- Avg: 4364 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23512 52.1% Number Absent: 20915 46.4% Number Marginal: 674 1.5% Average Signal (P): 4451.5 Average Signal (A): 97.8 Average Signal (M): 335.6 Average Signal (All): 2371.0 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 18938.8 P 37180.4 P 74726.1 P 43615.12 3.95 AFFX-GapdhMur/M32599 508.4 P 3162.5 P 14159.8 P 5943.56 27.85 AFFX-TransRecMur/X57349 711.2 P 369.9 P 1111.3 P 730.81 1.56 AFFX-PyruCarbMur/L09192 398.4 A 374.3 A 801.3 P 524.71 2.01 AFFX-18SRNAMur/X00686 87290.3 P 130773.3 P 93735.4 P 103932.99 1.07 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2344.4 P 3998.0 P 2435.0 P 2925.77 1.04 AFFX-BioC 5527.9 P 8014.6 P 6771.25 1.45 AFFX-BioD 15554.7 P 28401.6 P 21978.18 1.83 AFFX-Cre 81033.8 P 89382.6 P 85208.21 1.10 AFFX-Dap 85.8 A 99.7 A 12.9 A 66.12 0.15 AFFX-Lys 9.8 A 5.4 A 8.4 A 7.87 0.86 AFFX-Phe 49.9 A 5.7 A 126.2 A 60.57 2.53 AFFX-Thr 50.7 A 56.1 A 14.1 A 40.29 0.28 AFFX-Trp 64.1 A 2.6 A 2.8 A 23.16 0.04 AFFX-r2-Ec-bioB 4540.6 P 4433.8 P 3816.5 P 4263.63 0.84 AFFX-r2-Ec-bioC 8308.6 P 10323.8 P 9316.17 1.24 AFFX-r2-Ec-bioD 33509.8 P 42697.2 P 38103.51 1.27 AFFX-r2-P1-cre 92821.7 P 115835.9 P 104328.78 1.25 AFFX-r2-Bs-dap 26.9 A 2.1 A 43.9 A 24.32 1.63 AFFX-r2-Bs-lys 32.4 A 59.4 A 5.8 A 32.55 0.18 AFFX-r2-Bs-phe 1.7 A 2.8 A 87.4 A 30.64 50.00 AFFX-r2-Bs-thr 104.2 P 133.6 A 15.2 A 84.33 0.15 ______________________________________________________________________