Report Type: Expression Report Date: 12:41PM 11/23/2005 ______________________________________________________________________ Filename: Potter_1_11_21_05_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.940 Scale Factor (SF): 11.784 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 58.93 Std: 0.99 Min: 57.00 Max: 62.20 Noise: Avg: 2.95 Std: 0.08 Min: 2.70 Max: 3.20 Corner+ Avg: 79 Count: 32 Corner- Avg: 7471 Count: 32 Central- Avg: 7861 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 19167 42.5% Number Absent: 25229 55.9% Number Marginal: 705 1.6% Average Signal (P): 5506.1 Average Signal (A): 164.2 Average Signal (M): 596.8 Average Signal (All): 2441.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 23137.1 P 44330.5 P 67819.9 P 45095.85 2.93 AFFX-GapdhMur/M32599 1085.4 P 5429.5 P 14587.6 P 7034.17 13.44 AFFX-TransRecMur/X57349 665.7 P 209.3 P 584.8 P 486.60 0.88 AFFX-PyruCarbMur/L09192 406.4 A 535.4 A 562.1 P 501.29 1.38 AFFX-18SRNAMur/X00686 94199.2 P 147888.1 P 142445.4 P 128177.58 1.51 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 3077.5 P 6125.0 P 3663.1 P 4288.54 1.19 AFFX-BioC 7246.4 P 10006.4 P 8626.37 1.38 AFFX-BioD 15851.7 P 36552.9 P 26202.27 2.31 AFFX-Cre 90763.4 P 108129.1 P 99446.26 1.19 AFFX-Dap 9.3 A 24.9 A 113.6 A 49.26 12.22 AFFX-Lys 11.3 A 41.7 A 49.3 A 34.08 4.36 AFFX-Phe 10.4 A 4.1 A 206.9 A 73.79 19.92 AFFX-Thr 157.9 A 15.6 A 32.6 A 68.70 0.21 AFFX-Trp 15.8 A 22.3 A 5.4 A 14.51 0.34 AFFX-r2-Ec-bioB 5928.8 P 6149.6 P 5217.3 P 5765.25 0.88 AFFX-r2-Ec-bioC 12670.3 P 14180.9 P 13425.59 1.12 AFFX-r2-Ec-bioD 38905.6 P 50632.8 P 44769.23 1.30 AFFX-r2-P1-cre 114776.1 P 144444.5 P 129610.31 1.26 AFFX-r2-Bs-dap 11.2 A 7.0 A 31.7 A 16.63 2.83 AFFX-r2-Bs-lys 10.8 A 4.8 A 120.1 A 45.25 11.08 AFFX-r2-Bs-phe 2.6 A 9.2 A 226.3 A 79.39 85.44 AFFX-r2-Bs-thr 5.7 A 300.7 A 16.6 A 107.67 2.88 ______________________________________________________________________