Report Type: Expression Report Date: 12:31PM 11/12/2004 ______________________________________________________________________ Filename: Potter#5B_MOE_430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.040 Scale Factor (SF): 8.028 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.26 Std: 0.40 Min: 35.70 Max: 38.00 Noise: Avg: 1.24 Std: 0.03 Min: 1.10 Max: 1.30 Corner+ Avg: 58 Count: 32 Corner- Avg: 10032 Count: 32 Central- Avg: 10067 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 24091 53.4% Number Absent: 20370 45.2% Number Marginal: 640 1.4% Average Signal (P): 4162.5 Average Signal (A): 53.5 Average Signal (M): 183.6 Average Signal (All): 2250.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 1123.7 P 2221.4 P 17980.5 P 7108.49 16.00 AFFX-GAPDHMUR/M32599 2004.9 P 12746.1 P 44977.6 P 19909.52 22.43 AFFX-TRANSRECMUR/X57349 3.5 A 16.5 A 126.2 P 48.73 36.16 AFFX-PYRUCARBMUR/L09192 105.3 A 132.0 A 1552.2 P 596.49 14.74 AFFX-18SRNAMUR/X00686 1458.0 P 5242.3 P 6747.6 P 4482.65 4.63 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1733.1 P 3241.6 P 1897.2 P 2290.64 1.09 AFFX-BIOC 5921.7 P 6508.6 P 6215.14 1.10 AFFX-BIOD 13746.3 P 22559.8 P 18153.06 1.64 AFFX-CRE 45350.2 P 52609.3 P 48979.75 1.16 AFFX-DAP 28.2 A 41.3 A 12.0 A 27.20 0.43 AFFX-LYS 3.4 A 3.9 A 25.1 A 10.79 7.40 AFFX-PHE 4.4 A 2.0 A 12.7 A 6.37 2.91 AFFX-THR 2.8 A 4.4 A 15.7 A 7.63 5.58 AFFX-TRP 5.5 A 2.5 A 13.0 A 7.00 2.37 AFFX-R2-EC-BIOB 2840.3 P 2666.6 P 2486.5 P 2664.45 0.88 AFFX-R2-EC-BIOC 7138.0 P 7946.0 P 7542.00 1.11 AFFX-R2-EC-BIOD 26778.2 P 26935.3 P 26856.74 1.01 AFFX-R2-P1-CRE 55073.7 P 73219.7 P 64146.71 1.33 AFFX-R2-BS-DAP 3.7 A 0.7 A 1.7 A 2.03 0.45 AFFX-R2-BS-LYS 0.7 A 32.2 A 31.7 A 21.53 43.11 AFFX-R2-BS-PHE 14.8 A 42.3 A 12.0 A 23.06 0.81 AFFX-R2-BS-THR 7.3 A 14.4 A 23.1 A 14.91 3.18 ______________________________________________________________________