Report Type: Expression Report Date: 02:01PM 11/12/2004 ______________________________________________________________________ Filename: Potter#4B_MOE_430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.100 Scale Factor (SF): 6.143 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 38.11 Std: 0.18 Min: 37.60 Max: 38.70 Noise: Avg: 1.47 Std: 0.04 Min: 1.40 Max: 1.60 Corner+ Avg: 61 Count: 32 Corner- Avg: 11619 Count: 32 Central- Avg: 11756 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 24229 53.7% Number Absent: 20201 44.8% Number Marginal: 671 1.5% Average Signal (P): 3988.9 Average Signal (A): 57.8 Average Signal (M): 164.0 Average Signal (All): 2171.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 784.7 P 1396.1 P 13284.9 P 5155.22 16.93 AFFX-GAPDHMUR/M32599 2010.7 P 13284.3 P 39443.9 P 18246.31 19.62 AFFX-TRANSRECMUR/X57349 7.9 A 9.7 A 136.8 P 51.51 17.25 AFFX-PYRUCARBMUR/L09192 146.0 A 150.5 A 1296.2 P 530.89 8.88 AFFX-18SRNAMUR/X00686 1483.3 P 4234.0 P 4236.7 P 3317.98 2.86 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1249.7 P 2512.0 P 1472.9 P 1744.86 1.18 AFFX-BIOC 4393.2 P 5480.3 P 4936.74 1.25 AFFX-BIOD 10045.7 P 18104.0 P 14074.84 1.80 AFFX-CRE 35150.5 P 40504.4 P 37827.49 1.15 AFFX-DAP 27.7 A 23.3 A 11.2 A 20.73 0.40 AFFX-LYS 4.4 A 5.4 A 6.0 A 5.26 1.35 AFFX-PHE 1.8 A 7.4 A 50.2 A 19.79 28.19 AFFX-THR 7.3 A 4.7 A 7.1 A 6.38 0.98 AFFX-TRP 30.2 A 2.7 A 20.6 A 17.85 0.68 AFFX-R2-EC-BIOB 2307.2 P 1947.0 P 1834.1 P 2029.42 0.79 AFFX-R2-EC-BIOC 5214.5 P 6290.8 P 5752.66 1.21 AFFX-R2-EC-BIOD 20790.8 P 22703.5 P 21747.19 1.09 AFFX-R2-P1-CRE 42260.3 P 57070.2 P 49665.21 1.35 AFFX-R2-BS-DAP 22.6 A 1.0 A 1.7 A 8.43 0.07 AFFX-R2-BS-LYS 15.2 A 2.9 A 5.5 A 7.83 0.36 AFFX-R2-BS-PHE 1.6 A 27.4 A 7.5 A 12.19 4.67 AFFX-R2-BS-THR 43.5 P 44.8 A 1.4 A 29.93 0.03 ______________________________________________________________________