Report Type: Expression Report Date: 01:52PM 11/12/2004 ______________________________________________________________________ Filename: Potter#2B_MOE_430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.250 Scale Factor (SF): 9.346 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 41.06 Std: 0.23 Min: 40.40 Max: 41.70 Noise: Avg: 1.71 Std: 0.06 Min: 1.60 Max: 1.90 Corner+ Avg: 51 Count: 32 Corner- Avg: 9911 Count: 32 Central- Avg: 10893 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23012 51.0% Number Absent: 21472 47.6% Number Marginal: 617 1.4% Average Signal (P): 4414.1 Average Signal (A): 71.7 Average Signal (M): 218.6 Average Signal (All): 2289.4 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 1282.0 P 2548.5 P 18963.1 P 7597.85 14.79 AFFX-GAPDHMUR/M32599 3512.3 P 16778.2 P 50104.6 P 23465.03 14.27 AFFX-TRANSRECMUR/X57349 30.5 A 17.9 A 218.1 P 88.84 7.15 AFFX-PYRUCARBMUR/L09192 271.9 A 90.3 A 1534.2 P 632.13 5.64 AFFX-18SRNAMUR/X00686 2375.3 P 7533.9 P 13642.0 P 7850.38 5.74 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2177.5 P 3473.5 P 2111.2 P 2587.40 0.97 AFFX-BIOC 6306.9 P 6832.8 P 6569.87 1.08 AFFX-BIOD 12835.7 P 23771.3 P 18303.50 1.85 AFFX-CRE 43261.9 P 51512.7 P 47387.34 1.19 AFFX-DAP 4.9 A 7.8 A 34.2 A 15.63 6.94 AFFX-LYS 26.1 A 39.4 A 49.5 A 38.33 1.90 AFFX-PHE 3.2 A 7.2 A 83.6 A 31.31 26.19 AFFX-THR 5.3 A 22.1 A 7.2 A 11.53 1.35 AFFX-TRP 48.6 A 10.0 A 27.9 A 28.82 0.57 AFFX-R2-EC-BIOB 3191.4 P 3209.4 P 2656.2 P 3018.99 0.83 AFFX-R2-EC-BIOC 8098.2 P 8564.3 P 8331.23 1.06 AFFX-R2-EC-BIOD 29548.0 P 30468.1 P 30008.04 1.03 AFFX-R2-P1-CRE 59599.9 P 79388.1 P 69494.00 1.33 AFFX-R2-BS-DAP 2.2 A 3.1 A 5.7 A 3.67 2.62 AFFX-R2-BS-LYS 46.9 A 4.9 A 43.8 A 31.86 0.94 AFFX-R2-BS-PHE 12.4 A 4.9 A 11.9 A 9.71 0.96 AFFX-R2-BS-THR 75.1 P 80.5 A 18.2 A 57.91 0.24 ______________________________________________________________________