Report Type: Expression Report Date: 11:28AM 06/17/2005 ______________________________________________________________________ Filename: 3_RV_6_6_05_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.060 Scale Factor (SF): 5.013 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 60.23 Std: 0.61 Min: 59.00 Max: 62.20 Noise: Avg: 3.13 Std: 0.07 Min: 2.90 Max: 3.40 Corner+ Avg: 110 Count: 32 Corner- Avg: 16535 Count: 32 Central- Avg: 17411 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22241 49.3% Number Absent: 22231 49.3% Number Marginal: 629 1.4% Average Signal (P): 4374.9 Average Signal (A): 74.5 Average Signal (M): 244.6 Average Signal (All): 2197.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 1730.1 P 4771.2 P 25901.5 P 10800.90 14.97 AFFX-GAPDHMUR/M32599 3219.3 P 13740.2 P 40031.8 P 18997.11 12.44 AFFX-TRANSRECMUR/X57349 10.4 A 5.9 A 79.1 M 31.82 7.62 AFFX-PYRUCARBMUR/L09192 217.0 P 118.5 A 1271.1 P 535.52 5.86 AFFX-18SRNAMUR/X00686 17879.7 P 19510.5 P 14089.8 P 17159.96 0.79 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1186.8 P 2221.4 P 1354.8 P 1587.66 1.14 AFFX-BIOC 3935.7 P 4517.0 P 4226.35 1.15 AFFX-BIOD 8156.1 P 15811.3 P 11983.68 1.94 AFFX-CRE 39042.7 P 45244.5 P 42143.62 1.16 AFFX-DAP 5.4 A 6.6 A 42.8 A 18.28 7.94 AFFX-LYS 29.1 A 8.0 A 22.9 A 19.98 0.79 AFFX-PHE 7.1 A 2.4 A 26.0 A 11.79 3.67 AFFX-THR 74.0 A 14.1 A 12.7 A 33.61 0.17 AFFX-TRP 68.9 A 5.8 A 51.3 A 42.00 0.74 AFFX-R2-EC-BIOB 2065.5 P 2008.8 P 1771.9 P 1948.73 0.86 AFFX-R2-EC-BIOC 4880.9 P 5943.5 P 5412.19 1.22 AFFX-R2-EC-BIOD 18929.5 P 22716.0 P 20822.75 1.20 AFFX-R2-P1-CRE 45674.0 P 59748.4 P 52711.20 1.31 AFFX-R2-BS-DAP 14.6 A 36.9 A 3.8 A 18.43 0.26 AFFX-R2-BS-LYS 5.6 A 6.7 A 36.3 A 16.23 6.44 AFFX-R2-BS-PHE 12.8 A 1.7 A 101.5 P 38.66 7.95 AFFX-R2-BS-THR 42.9 A 7.8 A 8.0 A 19.57 0.19 ______________________________________________________________________