Report Type: Expression Report Date: 11:37AM 01/10/2006 ______________________________________________________________________ Filename: Steve6_1_6_06_MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.430 Scale Factor (SF): 7.148 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.14 Std: 0.38 Min: 41.00 Max: 43.30 Noise: Avg: 2.25 Std: 0.09 Min: 2.00 Max: 2.50 Corner+ Avg: 74 Count: 32 Corner- Avg: 13502 Count: 32 Central- Avg: 16624 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23076 51.2% Number Absent: 21262 47.1% Number Marginal: 763 1.7% Average Signal (P): 4478.2 Average Signal (A): 125.7 Average Signal (M): 330.7 Average Signal (All): 2356.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 5642.4 P 13056.7 P 29085.4 P 15928.16 5.15 AFFX-GapdhMur/M32599 838.3 P 5161.4 P 24898.7 P 10299.49 29.70 AFFX-TransRecMur/X57349 430.0 P 305.8 P 1209.0 P 648.27 2.81 AFFX-PyruCarbMur/L09192 49.7 A 289.9 A 432.4 P 257.33 8.70 AFFX-18SRNAMur/X00686 30451.4 P 93799.1 P 82696.7 P 68982.38 2.72 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2340.4 P 3642.7 P 2395.2 P 2792.80 1.02 AFFX-BioC 4640.9 P 6547.3 P 5594.13 1.41 AFFX-BioD 10543.7 P 23541.2 P 17042.49 2.23 AFFX-Cre 61908.1 P 66674.8 P 64291.43 1.08 AFFX-Dap 43.1 A 63.2 A 28.9 A 45.05 0.67 AFFX-Lys 12.3 A 18.5 A 49.6 A 26.78 4.04 AFFX-Phe 13.3 A 3.0 A 167.9 A 61.40 12.67 AFFX-Thr 47.1 A 65.5 A 9.9 A 40.86 0.21 AFFX-Trp 57.7 A 6.8 A 3.7 A 22.72 0.06 AFFX-r2-Ec-bioB 3780.3 P 3839.3 P 3379.2 P 3666.26 0.89 AFFX-r2-Ec-bioC 8149.7 P 8753.5 P 8451.61 1.07 AFFX-r2-Ec-bioD 26401.2 P 33819.2 P 30110.22 1.28 AFFX-r2-P1-cre 75538.2 P 103917.4 P 89727.81 1.38 AFFX-r2-Bs-dap 26.5 A 48.4 A 8.5 A 27.82 0.32 AFFX-r2-Bs-lys 46.3 A 67.8 A 37.0 A 50.39 0.80 AFFX-r2-Bs-phe 3.4 A 6.6 A 160.6 P 56.89 46.62 AFFX-r2-Bs-thr 111.7 A 153.5 A 101.0 A 122.05 0.90 ______________________________________________________________________