Report Type: Expression Report Date: 12:59PM 04/26/2006 ______________________________________________________________________ Filename: Potter_2_4_11_06_MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.970 Scale Factor (SF): 26.524 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 34.28 Std: 0.14 Min: 34.00 Max: 34.70 Noise: Avg: 1.22 Std: 0.04 Min: 1.10 Max: 1.30 Corner+ Avg: 33 Count: 32 Corner- Avg: 3870 Count: 32 Central- Avg: 4179 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 18515 41.1% Number Absent: 25840 57.3% Number Marginal: 746 1.7% Average Signal (P): 6805.4 Average Signal (A): 148.4 Average Signal (M): 500.4 Average Signal (All): 2887.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 8786.7 P 25253.9 P 67720.5 P 33920.36 7.71 AFFX-GapdhMur/M32599 1328.5 P 2494.0 P 9020.4 P 4280.98 6.79 AFFX-TransRecMur/X57349 133.6 A 168.5 A 162.1 P 154.75 1.21 AFFX-PyruCarbMur/L09192 216.9 A 378.9 A 540.3 P 378.72 2.49 AFFX-18SRNAMur/X00686 75375.4 P 273887.3 P 140475.4 P 163246.03 1.86 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 9165.6 P 16459.5 P 10382.2 P 12002.43 1.13 AFFX-BioC 21912.9 P 26065.3 P 23989.10 1.19 AFFX-BioD 58805.2 P 98944.6 P 78874.89 1.68 AFFX-Cre 254818.3 P 255111.9 P 254965.06 1.00 AFFX-Dap 134.1 A 29.2 A 8.4 A 57.22 0.06 AFFX-Lys 6.6 A 52.8 A 23.8 A 27.76 3.59 AFFX-Phe 67.0 A 5.5 A 50.1 A 40.85 0.75 AFFX-Thr 139.3 A 18.4 A 8.0 A 55.22 0.06 AFFX-Trp 20.8 A 6.2 A 63.5 A 30.15 3.06 AFFX-r2-Ec-bioB 15597.7 P 16188.3 P 11836.2 P 14540.74 0.76 AFFX-r2-Ec-bioC 28608.6 P 32775.5 P 30692.06 1.15 AFFX-r2-Ec-bioD 114680.1 P 137578.4 P 126129.25 1.20 AFFX-r2-P1-cre 277770.9 P 323877.3 P 300824.13 1.17 AFFX-r2-Bs-dap 164.5 A 83.9 A 7.4 A 85.28 0.05 AFFX-r2-Bs-lys 4.7 A 11.1 A 100.1 A 38.65 21.25 AFFX-r2-Bs-phe 37.1 A 2.8 A 152.8 A 64.23 4.12 AFFX-r2-Bs-thr 192.3 A 283.6 A 17.8 A 164.52 0.09 ______________________________________________________________________