Report Type: Expression Report Date: 11:08AM 01/10/2006 ______________________________________________________________________ Filename: Steve3_1_6_06_MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.260 Scale Factor (SF): 11.308 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.72 Std: 0.37 Min: 35.90 Max: 37.90 Noise: Avg: 1.99 Std: 0.06 Min: 1.90 Max: 2.10 Corner+ Avg: 84 Count: 32 Corner- Avg: 16242 Count: 32 Central- Avg: 17793 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 20475 45.4% Number Absent: 23899 53.0% Number Marginal: 727 1.6% Average Signal (P): 5445.5 Average Signal (A): 156.8 Average Signal (M): 437.4 Average Signal (All): 2562.3 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 13699.9 P 34001.1 P 69483.7 P 39061.56 5.07 AFFX-GapdhMur/M32599 1056.3 P 3563.5 P 14502.3 P 6374.04 13.73 AFFX-TransRecMur/X57349 289.4 P 47.3 A 243.3 P 193.31 0.84 AFFX-PyruCarbMur/L09192 139.9 A 259.2 A 697.6 P 365.60 4.99 AFFX-18SRNAMur/X00686 78582.2 P 165892.9 P 136301.4 P 126925.49 1.73 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 3867.9 P 7204.1 P 4231.0 P 5101.01 1.09 AFFX-BioC 8405.3 P 10847.0 P 9626.13 1.29 AFFX-BioD 19280.6 P 40393.9 P 29837.26 2.10 AFFX-Cre 111836.4 P 120812.5 P 116324.48 1.08 AFFX-Dap 75.7 A 73.3 A 101.2 A 83.42 1.34 AFFX-Lys 33.9 A 97.5 A 5.5 A 45.64 0.16 AFFX-Phe 10.1 A 5.2 A 307.6 A 107.64 30.40 AFFX-Thr 94.7 A 12.7 A 26.4 A 44.60 0.28 AFFX-Trp 16.5 A 17.1 A 74.6 A 36.09 4.51 AFFX-r2-Ec-bioB 7213.1 P 6715.8 P 6407.1 P 6778.69 0.89 AFFX-r2-Ec-bioC 15853.5 P 16573.8 P 16213.67 1.05 AFFX-r2-Ec-bioD 48973.8 P 57445.7 P 53209.77 1.17 AFFX-r2-P1-cre 134460.9 P 177246.0 P 155853.47 1.32 AFFX-r2-Bs-dap 10.0 A 2.0 A 4.2 A 5.38 0.42 AFFX-r2-Bs-lys 57.6 A 4.9 A 8.3 A 23.61 0.14 AFFX-r2-Bs-phe 63.5 A 19.4 A 91.8 A 58.23 1.45 AFFX-r2-Bs-thr 145.7 M 255.2 A 30.8 A 143.89 0.21 ______________________________________________________________________