Report Type: Expression Report Date: 02:24PM 06/15/2006 ______________________________________________________________________ Filename: 2_6_13_06_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.050 Scale Factor (SF): 10.508 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.74 Std: 0.23 Min: 35.60 Max: 37.20 Noise: Avg: 1.44 Std: 0.04 Min: 1.30 Max: 1.60 Corner+ Avg: 64 Count: 32 Corner- Avg: 10479 Count: 32 Central- Avg: 10689 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22252 49.3% Number Absent: 22120 49.0% Number Marginal: 729 1.6% Average Signal (P): 4525.3 Average Signal (A): 116.2 Average Signal (M): 324.0 Average Signal (All): 2294.9 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 530.1 P 1778.0 P 7166.8 P 3158.28 13.52 AFFX-GapdhMur/M32599 505.8 P 1974.6 P 8841.4 P 3773.93 17.48 AFFX-TransRecMur/X57349 213.4 P 163.7 P 920.0 P 432.39 4.31 AFFX-PyruCarbMur/L09192 490.3 P 249.4 A 4251.8 P 1663.83 8.67 AFFX-18SRNAMur/X00686 9163.3 P 53066.1 P 17481.8 P 26570.39 1.91 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 3063.0 P 4525.9 P 2762.1 P 3450.34 0.90 AFFX-BioC 7570.8 P 9608.3 P 8589.57 1.27 AFFX-BioD 20157.0 P 34921.9 P 27539.46 1.73 AFFX-Cre 83430.3 P 91442.7 P 87436.48 1.10 AFFX-Dap 31.6 A 37.4 A 8.5 A 25.81 0.27 AFFX-Lys 25.2 A 9.9 A 20.3 A 18.47 0.81 AFFX-Phe 8.2 A 3.7 A 18.1 A 10.01 2.22 AFFX-Thr 78.4 A 7.9 A 10.2 A 32.16 0.13 AFFX-Trp 61.9 A 35.6 A 1.6 A 33.03 0.03 AFFX-r2-Ec-bioB 5045.3 P 4807.3 P 4095.5 P 4649.36 0.81 AFFX-r2-Ec-bioC 10267.0 P 11532.6 P 10899.79 1.12 AFFX-r2-Ec-bioD 43273.7 P 49310.4 P 46292.05 1.14 AFFX-r2-P1-cre 84781.1 P 110704.2 P 97742.63 1.31 AFFX-r2-Bs-dap 7.9 A 1.5 A 5.2 A 4.90 0.66 AFFX-r2-Bs-lys 1.4 A 68.3 A 37.9 A 35.85 27.04 AFFX-r2-Bs-phe 1.4 A 2.3 A 74.5 A 26.08 54.23 AFFX-r2-Bs-thr 48.7 A 136.8 A 15.3 A 66.94 0.31 ______________________________________________________________________