Report Type: Expression Report Date: 02:13PM 07/13/2006 ______________________________________________________________________ Filename: Prox_1_7_07_06_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.160 Scale Factor (SF): 14.086 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 37.65 Std: 0.17 Min: 36.90 Max: 38.00 Noise: Avg: 1.78 Std: 0.05 Min: 1.60 Max: 1.90 Corner+ Avg: 69 Count: 32 Corner- Avg: 8711 Count: 32 Central- Avg: 9614 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 20898 46.3% Number Absent: 23387 51.9% Number Marginal: 816 1.8% Average Signal (P): 4972.6 Average Signal (A): 201.7 Average Signal (M): 611.3 Average Signal (All): 2419.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 2841.2 P 8035.9 P 24831.3 P 11902.77 8.74 AFFX-GapdhMur/M32599 565.2 P 1904.9 P 5913.9 P 2794.64 10.46 AFFX-TransRecMur/X57349 1544.6 P 971.0 P 3849.4 P 2121.65 2.49 AFFX-PyruCarbMur/L09192 921.2 P 639.6 A 2512.8 P 1357.88 2.73 AFFX-18SRNAMur/X00686 80702.7 P 175084.5 P 99764.1 P 118517.09 1.24 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 4398.5 P 7047.3 P 4047.9 P 5164.57 0.92 AFFX-BioC 11267.4 P 14255.8 P 12761.57 1.27 AFFX-BioD 27719.1 P 54390.2 P 41054.62 1.96 AFFX-Cre 129433.1 P 141896.7 P 135664.91 1.10 AFFX-Dap 14.7 A 94.8 A 8.2 A 39.24 0.56 AFFX-Lys 15.2 A 107.6 A 9.1 A 43.95 0.60 AFFX-Phe 14.8 A 19.5 A 196.1 A 76.81 13.24 AFFX-Thr 149.6 A 14.4 A 29.7 A 64.56 0.20 AFFX-Trp 86.3 A 7.4 A 9.3 A 34.35 0.11 AFFX-r2-Ec-bioB 7453.4 P 6869.9 P 6028.5 P 6783.93 0.81 AFFX-r2-Ec-bioC 16027.0 P 17327.3 P 16677.14 1.08 AFFX-r2-Ec-bioD 57888.0 P 76746.9 P 67317.46 1.33 AFFX-r2-P1-cre 138960.8 P 180931.2 P 159946.00 1.30 AFFX-r2-Bs-dap 66.7 A 2.8 A 93.7 A 54.42 1.40 AFFX-r2-Bs-lys 24.6 A 48.0 A 68.1 A 46.92 2.77 AFFX-r2-Bs-phe 30.2 A 6.3 A 83.5 A 40.01 2.76 AFFX-r2-Bs-thr 232.3 P 379.4 A 9.8 A 207.18 0.04 ______________________________________________________________________