Report Type: Expression Report Date: 02:22PM 06/15/2006 ______________________________________________________________________ Filename: 1_6_13_06_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.900 Scale Factor (SF): 23.532 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 31.12 Std: 0.21 Min: 30.40 Max: 31.50 Noise: Avg: 1.14 Std: 0.04 Min: 1.00 Max: 1.30 Corner+ Avg: 55 Count: 32 Corner- Avg: 9686 Count: 32 Central- Avg: 10374 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 20211 44.8% Number Absent: 24158 53.6% Number Marginal: 732 1.6% Average Signal (P): 5274.0 Average Signal (A): 187.6 Average Signal (M): 574.9 Average Signal (All): 2473.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 1392.2 P 2684.7 P 10236.0 P 4770.98 7.35 AFFX-GapdhMur/M32599 482.0 P 1902.0 P 8750.4 P 3711.46 18.15 AFFX-TransRecMur/X57349 518.4 P 302.6 A 1168.3 P 663.09 2.25 AFFX-PyruCarbMur/L09192 277.2 A 211.5 A 2590.0 P 1026.27 9.34 AFFX-18SRNAMur/X00686 44356.8 P 184254.3 P 39795.1 P 89468.75 0.90 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 8285.2 P 11782.9 P 9419.8 P 9829.28 1.14 AFFX-BioC 21876.8 P 23934.1 P 22905.43 1.09 AFFX-BioD 54310.4 P 83317.0 P 68813.69 1.53 AFFX-Cre 193788.1 P 207775.3 P 200781.72 1.07 AFFX-Dap 137.7 A 38.0 A 6.2 A 60.62 0.04 AFFX-Lys 3.7 A 5.8 A 126.3 P 45.28 33.86 AFFX-Phe 67.4 A 5.7 A 213.2 A 95.44 3.16 AFFX-Thr 71.2 A 115.8 A 22.9 A 69.97 0.32 AFFX-Trp 10.9 A 18.2 A 72.6 A 33.90 6.64 AFFX-r2-Ec-bioB 11816.7 P 11844.2 P 11521.1 P 11727.33 0.97 AFFX-r2-Ec-bioC 27984.1 P 31506.8 P 29745.45 1.13 AFFX-r2-Ec-bioD 117087.4 P 134130.5 P 125608.95 1.15 AFFX-r2-P1-cre 200715.7 P 258101.6 P 229408.66 1.29 AFFX-r2-Bs-dap 20.5 A 3.6 A 50.9 A 24.99 2.48 AFFX-r2-Bs-lys 32.9 A 139.9 A 132.9 M 101.90 4.03 AFFX-r2-Bs-phe 22.7 A 11.8 A 4.9 A 13.14 0.22 AFFX-r2-Bs-thr 92.8 M 311.3 A 23.3 A 142.46 0.25 ______________________________________________________________________