Report Type: Expression Report Date: 02:25PM 06/15/2006 ______________________________________________________________________ Filename: 3_6_13_06_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.070 Scale Factor (SF): 9.825 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.67 Std: 0.31 Min: 35.40 Max: 37.20 Noise: Avg: 1.59 Std: 0.03 Min: 1.50 Max: 1.70 Corner+ Avg: 60 Count: 32 Corner- Avg: 8933 Count: 32 Central- Avg: 9797 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22212 49.2% Number Absent: 22112 49.0% Number Marginal: 777 1.7% Average Signal (P): 4557.6 Average Signal (A): 120.5 Average Signal (M): 344.3 Average Signal (All): 2309.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 746.7 P 2212.0 P 9977.7 P 4312.15 13.36 AFFX-GapdhMur/M32599 395.4 P 2903.9 P 10253.3 P 4517.53 25.93 AFFX-TransRecMur/X57349 413.2 P 183.8 P 2342.6 P 979.84 5.67 AFFX-PyruCarbMur/L09192 36.9 A 369.7 A 297.4 P 234.66 8.05 AFFX-18SRNAMur/X00686 6855.1 P 46595.6 P 23787.3 P 25745.97 3.47 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2855.7 P 4419.4 P 2680.4 P 3318.47 0.94 AFFX-BioC 8049.3 P 9356.7 P 8702.99 1.16 AFFX-BioD 19655.3 P 32989.3 P 26322.27 1.68 AFFX-Cre 76107.4 P 83697.5 P 79902.45 1.10 AFFX-Dap 26.5 A 27.7 A 33.0 A 29.05 1.24 AFFX-Lys 1.3 A 22.9 A 44.7 A 22.95 34.43 AFFX-Phe 6.1 A 9.6 A 64.3 A 26.70 10.54 AFFX-Thr 24.1 A 71.4 A 8.7 A 34.75 0.36 AFFX-Trp 34.1 A 7.4 A 20.8 A 20.78 0.61 AFFX-r2-Ec-bioB 4728.7 P 4120.7 P 3947.9 P 4265.74 0.83 AFFX-r2-Ec-bioC 10920.2 P 10479.9 P 10700.04 0.96 AFFX-r2-Ec-bioD 39236.1 P 43848.6 P 41542.37 1.12 AFFX-r2-P1-cre 80789.2 P 104461.3 P 92625.24 1.29 AFFX-r2-Bs-dap 4.2 A 3.4 A 3.0 A 3.52 0.71 AFFX-r2-Bs-lys 4.7 A 40.5 A 76.3 A 40.49 16.40 AFFX-r2-Bs-phe 4.0 A 9.2 A 84.2 A 32.48 20.97 AFFX-r2-Bs-thr 59.3 A 137.7 A 10.5 A 69.17 0.18 ______________________________________________________________________