Report Type: Expression Report Date: 02:13PM 07/13/2006 ______________________________________________________________________ Filename: CCD_1_7_07_06_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.100 Scale Factor (SF): 18.845 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.96 Std: 0.15 Min: 36.60 Max: 37.30 Noise: Avg: 1.57 Std: 0.04 Min: 1.50 Max: 1.70 Corner+ Avg: 81 Count: 32 Corner- Avg: 8424 Count: 32 Central- Avg: 9642 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 20620 45.7% Number Absent: 23650 52.4% Number Marginal: 831 1.8% Average Signal (P): 5092.1 Average Signal (A): 221.7 Average Signal (M): 635.6 Average Signal (All): 2456.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 9134.9 P 26193.2 P 56583.3 P 30637.11 6.19 AFFX-GapdhMur/M32599 638.5 P 2435.7 P 7864.5 P 3646.26 12.32 AFFX-TransRecMur/X57349 3289.6 P 1759.4 P 6171.9 P 3740.29 1.88 AFFX-PyruCarbMur/L09192 503.6 A 798.3 A 613.3 P 638.40 1.22 AFFX-18SRNAMur/X00686 98945.7 P 234215.4 P 147622.5 P 160261.20 1.49 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 5110.0 P 7367.6 P 4971.1 P 5816.20 0.97 AFFX-BioC 13477.9 P 16765.5 P 15121.72 1.24 AFFX-BioD 30430.6 P 66059.5 P 48245.08 2.17 AFFX-Cre 148220.9 P 167453.0 P 157837.00 1.13 AFFX-Dap 94.1 A 85.5 A 20.0 A 66.51 0.21 AFFX-Lys 60.1 A 23.7 A 8.4 A 30.74 0.14 AFFX-Phe 14.3 A 8.8 A 267.6 A 96.89 18.65 AFFX-Thr 146.7 A 65.2 A 34.8 A 82.24 0.24 AFFX-Trp 32.1 A 14.2 A 10.1 A 18.78 0.31 AFFX-r2-Ec-bioB 8767.1 P 8712.7 P 6944.7 P 8141.47 0.79 AFFX-r2-Ec-bioC 18319.5 P 21022.5 P 19670.98 1.15 AFFX-r2-Ec-bioD 70775.4 P 86820.9 P 78798.13 1.23 AFFX-r2-P1-cre 162318.9 P 214033.2 P 188176.06 1.32 AFFX-r2-Bs-dap 45.3 A 28.5 A 78.9 A 50.89 1.74 AFFX-r2-Bs-lys 6.8 A 3.3 A 4.0 A 4.71 0.58 AFFX-r2-Bs-phe 4.9 A 8.3 A 6.9 A 6.69 1.42 AFFX-r2-Bs-thr 200.3 P 363.3 A 20.1 A 194.59 0.10 ______________________________________________________________________