Report Type: Expression Report Date: 01:42PM 02/09/2007 ______________________________________________________________________ Filename: Six2_3_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.520 Scale Factor (SF): 4.350 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 45.89 Std: 0.59 Min: 44.30 Max: 47.50 Noise: Avg: 2.52 Std: 0.10 Min: 2.30 Max: 2.80 Corner+ Avg: 102 Count: 32 Corner- Avg: 9647 Count: 32 Central- Avg: 10278 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23143 51.3% Number Absent: 21278 47.2% Number Marginal: 680 1.5% Average Signal (P): 4151.2 Average Signal (A): 80.6 Average Signal (M): 339.9 Average Signal (All): 2173.3 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 2735.8 P 7691.5 P 24837.1 P 11754.82 9.08 AFFX-GapdhMur/M32599 1405.4 P 6741.8 P 23702.5 P 10616.57 16.87 AFFX-TransRecMur/X57349 137.1 P 110.8 P 814.7 P 354.22 5.94 AFFX-PyruCarbMur/L09192 148.8 A 215.9 A 936.4 P 433.71 6.29 AFFX-18SRNAMur/X00686 6831.7 P 35519.9 P 16765.4 P 19705.64 2.45 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1122.2 P 2002.8 P 1044.1 P 1389.70 0.93 AFFX-BioC 1939.9 P 2886.9 P 2413.38 1.49 AFFX-BioD 8513.6 P 16148.7 P 12331.16 1.90 AFFX-Cre 42620.8 P 50222.9 P 46421.86 1.18 AFFX-Dap 39.6 A 30.5 A 6.3 A 25.44 0.16 AFFX-Lys 4.1 A 17.5 A 11.5 A 11.02 2.81 AFFX-Phe 9.0 A 3.0 A 87.5 A 33.17 9.71 AFFX-Thr 16.2 A 4.0 A 7.2 A 9.14 0.44 AFFX-Trp 7.2 A 4.0 A 2.7 A 4.64 0.38 AFFX-r2-Ec-bioB 2207.8 P 1870.4 P 1672.4 P 1916.86 0.76 AFFX-r2-Ec-bioC 3003.4 P 3775.7 P 3389.59 1.26 AFFX-r2-Ec-bioD 18990.3 P 24313.6 P 21651.94 1.28 AFFX-r2-P1-cre 48542.5 P 68200.7 P 58371.60 1.40 AFFX-r2-Bs-dap 5.0 A 1.7 A 24.0 A 10.21 4.83 AFFX-r2-Bs-lys 30.3 A 4.3 A 25.6 A 20.05 0.84 AFFX-r2-Bs-phe 23.5 A 3.0 A 71.7 A 32.76 3.05 AFFX-r2-Bs-thr 71.0 A 103.0 A 23.0 A 65.66 0.32 ______________________________________________________________________