Report Type: Expression Report Date: 01:42PM 12/13/2005 ______________________________________________________________________ Filename: KPL_pnd2_3_testes_Mouse430_2_SFFRD0014.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.51 Scale Factor (SF): 3.189 TGT Value: 500 Norm Factor (NF): 1 ______________________________________________________________________ Background: Avg: 44.26 Std: 0.53 Min: 43.10 Max: 45.70 Noise: Avg: 2.52 Std: 0.06 Min: 2.40 Max: 2.70 Corner+ Avg: 166 Count: 32 Corner- Avg: 18755 Count: 32 Central- Avg: 21761 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold "and are not called ""No Call""." Total Probe Sets: 45101 Number Present: 25862 57.30% Number Absent: 18602 41.20% Number Marginal: 637 1.40% Average Signal (P): 1304.2 Average Signal (A): 33.4 Average Signal (M): 95.6 Average Signal (All): 763 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 28021.5 P 28680.3 P 39873.7 P 32191.81 1.42 AFFX-GAPDHMUR/M32599 25150 P 20943.8 P 17445.5 P 21179.77 0.69 AFFX-TRANSRECMUR/X57349 88.2 P 88.2 P 284.8 P 153.74 3.23 AFFX-PYRUCARBMUR/L09192 319.2 P 321 P 594 P 411.4 1.86 AFFX-18SRNAMUR/X00686 396.1 P 170.8 P 193.1 P 253.33 0.49 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 631.8 P 927.7 P 528 P 695.83 0.84 AFFX-BIOC 1892 P 2224.6 P 2058.29 1.18 AFFX-BIOD 3718.9 P 7942.8 P 5830.81 2.14 AFFX-CRE 20930.6 P 26279.6 P 23605.09 1.26 AFFX-DAP 428.6 P 686.1 P 928.3 P 681.02 2.17 AFFX-LYS 53.1 P 108 P 193.8 P 118.29 3.65 AFFX-PHE 70.4 P 72.6 P 134.8 P 92.58 1.91 AFFX-THR 96.3 P 159 P 230.8 P 162.05 2.4 AFFX-TRP 21.3 A 4 A 3.4 A 9.57 0.16 AFFX-R2-EC-BIOB 829 P 967.9 P 884.6 P 893.81 1.07 AFFX-R2-EC-BIOC 2553.9 P 2990.8 P 2772.35 1.17 AFFX-R2-EC-BIOD 10555.4 P 9784.6 P 10170.03 0.93 AFFX-R2-P1-CRE 28609.9 P 39951.3 P 34280.6 1.4 AFFX-R2-BS-DAP 500.2 P 765.1 P 1020.6 P 761.97 2.04 AFFX-R2-BS-LYS 72.9 P 52.9 P 108 P 77.94 1.48 AFFX-R2-BS-PHE 94.6 P 75.8 P 196.5 P 122.3 2.08 AFFX-R2-BS-THR 182.5 P 240.5 P 229 P 217.35 1.25 ______________________________________________________________________