Report Type: Expression Report Date: 12:15PM 12/13/2005 ______________________________________________________________________ Filename: KPL_pnd2_2_testes_Mouse430_2_SFFRD0014.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.64 Scale Factor (SF): 2.485 TGT Value: 500 Norm Factor (NF): 1 ______________________________________________________________________ Background: Avg: 48.84 Std: 0.66 Min: 47.80 Max: 50.60 Noise: Avg: 2.81 Std: 0.09 Min: 2.60 Max: 3.10 Corner+ Avg: 224 Count: 32 Corner- Avg: 22836 Count: 32 Central- Avg: 24115 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold "and are not called ""No Call""." Total Probe Sets: 45101 Number Present: 27008 59.90% Number Absent: 17482 38.80% Number Marginal: 611 1.40% Average Signal (P): 1232.8 Average Signal (A): 29.9 Average Signal (M): 87.3 Average Signal (All): 751 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 24444.7 P 23782.3 P 32534.4 P 26920.46 1.33 AFFX-GAPDHMUR/M32599 23293.1 P 18901.1 P 16346.1 P 19513.43 0.7 AFFX-TRANSRECMUR/X57349 82.4 P 82.7 P 175.7 P 113.61 2.13 AFFX-PYRUCARBMUR/L09192 266.9 P 296.9 P 479.5 P 347.78 1.8 AFFX-18SRNAMUR/X00686 1461.3 P 385.7 P 315.5 P 720.87 0.22 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 516.5 P 914.8 P 551.5 P 660.95 1.07 AFFX-BIOC 1737.3 P 2052.6 P 1894.94 1.18 AFFX-BIOD 3531.2 P 6932.4 P 5231.8 1.96 AFFX-CRE 19675 P 23118.7 P 21396.86 1.18 AFFX-DAP 515 P 804.8 P 1063.4 P 794.42 2.06 AFFX-LYS 48.7 P 128.4 P 194.8 P 124 4 AFFX-PHE 69.4 P 107.1 P 191 P 122.49 2.75 AFFX-THR 144.8 P 170.3 P 293 P 202.72 2.02 AFFX-TRP 26.6 A 1.3 A 2.6 A 10.17 0.1 AFFX-R2-EC-BIOB 765.2 P 804.4 P 791.6 P 787.06 1.03 AFFX-R2-EC-BIOC 2277.3 P 2374.9 P 2326.1 1.04 AFFX-R2-EC-BIOD 9469.3 P 9254 P 9361.69 0.98 AFFX-R2-P1-CRE 23828.9 P 32817.6 P 28323.24 1.38 AFFX-R2-BS-DAP 612.4 P 966.8 P 1153.2 P 910.77 1.88 AFFX-R2-BS-LYS 100.6 P 84.9 P 79.6 P 88.37 0.79 AFFX-R2-BS-PHE 160.8 P 55 P 228.6 P 148.11 1.42 AFFX-R2-BS-THR 203.3 P 267.9 P 431.1 P 300.76 2.12 ______________________________________________________________________