Report Type:	Expression Report	
Date:          	11:01AM 12/13/2005	
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Filename:		KPL_pnd0.5_21_WholeAnimal_reference_Mouse430_2_SFFRD0014.CHP
Probe Array Type:	Mouse430_2	
Algorithm:		Statistical
Probe Pair Thr:	8	
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.6	
Scale Factor (SF):	2.66	
TGT Value:		500		
Norm Factor (NF):	1			
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Background:				
	Avg: 47.29	Std: 0.54	Min: 46.00	Max: 48.20
Noise:				
	Avg: 2.82	Std: 0.09	Min: 2.60	Max: 3.10
Corner+				
	Avg: 301		Count: 32	
Corner-				
	Avg: 23257		Count: 32	
Central-				
	Avg: 24295		Count: 9	
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The following data represents probe sets that exceed the probe pair threshold 								
"and are not called ""No Call""."								

Total Probe Sets:	45101							
Number Present:	26507	58.80%						
Number Absent:	17977	39.90%						
Number Marginal:	617	1.40%						

Average Signal (P):	1333.1							
Average Signal (A):	37.3							
Average Signal (M):	115							
Average Signal (All):	799.9							
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Housekeeping Controls:								
Probe Set	Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-B-ACTINMUR/M12481	18433.7	P	10761.3	P	25298.3	P	18164.45	1.37
AFFX-GAPDHMUR/M32599	31869.9	P	29004.1	P	26173.6	P	29015.84	0.82
AFFX-TRANSRECMUR/X57349	113.2	P	99.3	P	316.6	P	176.4	2.8
AFFX-PYRUCARBMUR/L09192	141.6	P	177	P	1950.1	P	756.22	13.77
AFFX-18SRNAMUR/X00686	63.8	A	100.7	A	119.2	P	94.57	1.87
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Spike Controls:								
Probe Set	Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB	396.4	P	719.3	P	419.4	P	511.72	1.06
AFFX-BIOC	1643.9	P	 	 	1671.2	P	1657.55	1.02
AFFX-BIOD	2823.6	P	 	 	7365.7	P	5094.66	2.61
AFFX-CRE	17072.4	P	 	 	23223.9	P	20148.14	1.36
AFFX-DAP	1853.3	P	2797.3	P	4892.5	P	3181.02	2.64
AFFX-LYS	210.9	P	337	P	822.9	P	456.95	3.9
AFFX-PHE	293.4	P	414.7	P	529.5	P	412.52	1.8
AFFX-THR	341.8	P	530.3	P	1067.1	P	646.42	3.12
AFFX-TRP	21.3	A	3.4	A	17.6	A	14.09	0.82
AFFX-R2-EC-BIOB	661.6	P	629.1	P	597.6	P	629.43	0.9
AFFX-R2-EC-BIOC	1976.5	P	 	 	2211.1	P	2093.79	1.12
AFFX-R2-EC-BIOD	8596.3	P	 	 	9791.5	P	9193.92	1.14
AFFX-R2-P1-CRE	23598.7	P	 	 	32265.5	P	27932.07	1.37
AFFX-R2-BS-DAP	2108.9	P	2941.6	P	5157	P	3402.49	2.45
AFFX-R2-BS-LYS	311.1	P	513.6	P	313.9	P	379.53	1.01
AFFX-R2-BS-PHE	438.2	P	479.7	P	980.5	P	632.81	2.24
AFFX-R2-BS-THR	533.1	P	808	P	1345.9	P	895.69	2.52
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