Report Type: Expression Report Date: 12:11PM 05/25/2006 ______________________________________________________________________ Filename: KPL_pnd2_3_epididymus_Mouse430_2_KWGU011601_b.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.720 Scale Factor (SF): 5.314 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 56.02 Std: 0.35 Min: 55.20 Max: 57.00 Noise: Avg: 2.56 Std: 0.06 Min: 2.40 Max: 2.70 Corner+ Avg: 88 Count: 32 Corner- Avg: 9680 Count: 32 Central- Avg: 11168 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 20061 44.5% Number Absent: 24358 54.0% Number Marginal: 682 1.5% Average Signal (P): 1920.0 Average Signal (A): 41.2 Average Signal (M): 134.2 Average Signal (All): 878.3 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 148.8 P 1198.3 P 12011.4 P 4452.83 80.73 AFFX-GAPDHMUR/M32599 52.0 A 214.7 P 3284.9 P 1183.88 63.16 AFFX-TRANSRECMUR/X57349 6.3 A 2.7 A 39.9 A 16.34 6.30 AFFX-PYRUCARBMUR/L09192 40.1 A 14.8 A 48.3 A 34.43 1.20 AFFX-18SRNAMUR/X00686 2334.9 P 10063.1 P 4267.7 P 5555.21 1.83 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 676.8 P 924.9 P 589.1 P 730.28 0.87 AFFX-BIOC 2085.2 P 1791.8 P 1938.49 0.86 AFFX-BIOD 3379.4 P 7540.7 P 5460.08 2.23 AFFX-CRE 19976.2 P 25169.5 P 22572.84 1.26 AFFX-DAP 53.7 M 127.7 P 1274.6 P 485.32 23.75 AFFX-LYS 7.2 A 10.0 A 355.8 P 124.37 49.09 AFFX-PHE 4.8 A 50.2 M 314.5 P 123.17 65.31 AFFX-THR 21.1 A 3.5 A 282.7 P 102.42 13.39 AFFX-TRP 30.8 A 6.0 A 2.9 A 13.26 0.10 AFFX-R2-EC-BIOB 952.7 P 984.5 P 680.6 P 872.61 0.71 AFFX-R2-EC-BIOC 2020.7 P 2663.5 P 2342.09 1.32 AFFX-R2-EC-BIOD 8597.8 P 8503.2 P 8550.51 0.99 AFFX-R2-P1-CRE 29294.4 P 40765.0 P 35029.72 1.39 AFFX-R2-BS-DAP 17.0 A 89.0 P 1648.1 P 584.72 97.01 AFFX-R2-BS-LYS 15.7 A 52.1 A 80.1 P 49.27 5.11 AFFX-R2-BS-PHE 10.5 A 58.0 A 368.6 P 145.69 35.07 AFFX-R2-BS-THR 54.3 A 10.4 A 373.4 P 146.03 6.88 ______________________________________________________________________