Report Type: Expression Report Date: 11:57AM 05/25/2006 ______________________________________________________________________ Filename: KPL_pnd2_2_epididymus_Mouse430_2_KWGU011601_b.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.720 Scale Factor (SF): 5.295 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 55.84 Std: 0.60 Min: 53.90 Max: 57.20 Noise: Avg: 2.59 Std: 0.09 Min: 2.40 Max: 2.80 Corner+ Avg: 96 Count: 32 Corner- Avg: 9923 Count: 32 Central- Avg: 10755 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23264 51.6% Number Absent: 21141 46.9% Number Marginal: 696 1.5% Average Signal (P): 1505.2 Average Signal (A): 50.3 Average Signal (M): 155.0 Average Signal (All): 802.4 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 11797.7 P 18920.4 P 37285.2 P 22667.76 3.16 AFFX-GAPDHMUR/M32599 2607.0 P 10241.0 P 17756.0 P 10201.33 6.81 AFFX-TRANSRECMUR/X57349 21.3 A 15.8 A 73.5 A 36.88 3.44 AFFX-PYRUCARBMUR/L09192 86.4 A 113.6 M 173.6 P 124.54 2.01 AFFX-18SRNAMUR/X00686 22453.5 P 12169.5 P 9352.5 P 14658.51 0.42 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 615.9 P 930.4 P 537.4 P 694.58 0.87 AFFX-BIOC 1792.4 P 1873.6 P 1832.99 1.05 AFFX-BIOD 3163.3 P 6404.6 P 4783.92 2.02 AFFX-CRE 19601.9 P 22675.8 P 21138.85 1.16 AFFX-DAP 154.3 P 972.7 P 1949.3 P 1025.46 12.63 AFFX-LYS 15.3 A 149.3 P 398.0 P 187.54 25.94 AFFX-PHE 58.4 P 193.5 P 483.6 P 245.17 8.28 AFFX-THR 73.2 A 167.1 P 794.3 P 344.87 10.85 AFFX-TRP 3.1 A 2.6 A 18.4 A 8.03 5.94 AFFX-R2-EC-BIOB 740.9 P 895.3 P 694.7 P 776.97 0.94 AFFX-R2-EC-BIOC 2105.5 P 2425.7 P 2265.61 1.15 AFFX-R2-EC-BIOD 8330.5 P 8215.4 P 8272.98 0.99 AFFX-R2-P1-CRE 26020.2 P 39057.8 P 32538.99 1.50 AFFX-R2-BS-DAP 181.2 P 1274.5 P 2285.7 P 1247.17 12.61 AFFX-R2-BS-LYS 24.7 A 119.0 P 171.2 P 104.96 6.93 AFFX-R2-BS-PHE 127.3 P 206.5 P 632.1 P 321.97 4.96 AFFX-R2-BS-THR 62.4 P 368.7 P 1036.7 P 489.30 16.61 ______________________________________________________________________