Report Type: Expression Report Date: 02:49PM 05/25/2006 ______________________________________________________________________ Filename: KPL_gd16_9_epididymus_Mouse430_2_KWGU011601_b.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.230 Scale Factor (SF): 4.409 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 71.19 Std: 1.47 Min: 67.50 Max: 74.30 Noise: Avg: 3.79 Std: 0.09 Min: 3.60 Max: 4.10 Corner+ Avg: 122 Count: 32 Corner- Avg: 10100 Count: 32 Central- Avg: 10870 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22873 50.7% Number Absent: 21552 47.8% Number Marginal: 676 1.5% Average Signal (P): 1425.1 Average Signal (A): 57.9 Average Signal (M): 183.6 Average Signal (All): 753.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 10623.6 P 18161.7 P 31491.3 P 20092.24 2.96 AFFX-GAPDHMUR/M32599 3232.1 P 9102.9 P 16489.8 P 9608.28 5.10 AFFX-TRANSRECMUR/X57349 32.0 A 23.1 A 88.9 P 47.98 2.78 AFFX-PYRUCARBMUR/L09192 130.9 A 5.8 A 197.5 P 111.37 1.51 AFFX-18SRNAMUR/X00686 17204.5 P 7012.9 P 6847.8 P 10355.10 0.40 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 572.2 P 736.9 P 546.9 P 618.67 0.96 AFFX-BIOC 1653.8 P 1606.0 P 1629.91 0.97 AFFX-BIOD 3205.8 P 5961.2 P 4583.53 1.86 AFFX-CRE 16929.3 P 19753.9 P 18341.60 1.17 AFFX-DAP 176.8 P 1553.6 P 2719.5 P 1483.32 15.38 AFFX-LYS 8.1 A 214.6 P 575.3 P 266.00 70.87 AFFX-PHE 112.2 P 336.8 P 649.2 P 366.10 5.78 AFFX-THR 70.3 A 277.5 P 880.9 P 409.57 12.53 AFFX-TRP 12.0 A 3.9 A 24.4 A 13.44 2.03 AFFX-R2-EC-BIOB 844.6 P 878.0 P 799.4 P 840.67 0.95 AFFX-R2-EC-BIOC 1896.8 P 1990.2 P 1943.54 1.05 AFFX-R2-EC-BIOD 7295.8 P 8483.5 P 7889.68 1.16 AFFX-R2-P1-CRE 23503.2 P 34534.6 P 29018.91 1.47 AFFX-R2-BS-DAP 366.8 P 2079.9 P 3554.9 P 2000.53 9.69 AFFX-R2-BS-LYS 68.7 P 242.1 P 311.6 P 207.46 4.53 AFFX-R2-BS-PHE 206.2 P 283.6 P 859.1 P 449.64 4.17 AFFX-R2-BS-THR 108.4 P 424.3 P 1386.2 P 639.61 12.79 ______________________________________________________________________