Report Type: Expression Report Date: 02:32PM 05/25/2006 ______________________________________________________________________ Filename: KPL_gd16_8_epididymus_Mouse430_2_KWGU011601_b.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.660 Scale Factor (SF): 4.745 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 52.90 Std: 0.88 Min: 50.40 Max: 54.40 Noise: Avg: 2.53 Std: 0.07 Min: 2.40 Max: 2.70 Corner+ Avg: 94 Count: 32 Corner- Avg: 10219 Count: 32 Central- Avg: 10750 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23901 53.0% Number Absent: 20545 45.6% Number Marginal: 655 1.5% Average Signal (P): 1428.0 Average Signal (A): 45.7 Average Signal (M): 153.0 Average Signal (All): 779.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 11685.0 P 18398.8 P 36791.9 P 22291.89 3.15 AFFX-GAPDHMUR/M32599 2935.1 P 9340.3 P 19171.1 P 10482.15 6.53 AFFX-TRANSRECMUR/X57349 16.6 A 9.7 A 80.0 P 35.45 4.80 AFFX-PYRUCARBMUR/L09192 62.8 A 109.9 A 173.7 P 115.49 2.77 AFFX-18SRNAMUR/X00686 20551.4 P 10769.7 P 9559.9 P 13627.00 0.47 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 467.7 P 684.8 P 441.2 P 531.25 0.94 AFFX-BIOC 1333.0 P 1497.4 P 1415.18 1.12 AFFX-BIOD 2794.8 P 5099.3 P 3947.05 1.82 AFFX-CRE 17096.8 P 20881.6 P 18989.21 1.22 AFFX-DAP 266.9 P 1648.8 P 2937.9 P 1617.90 11.01 AFFX-LYS 56.3 P 281.9 P 724.9 P 354.39 12.88 AFFX-PHE 104.5 P 309.9 P 644.3 P 352.91 6.16 AFFX-THR 78.4 M 272.1 P 1107.0 P 485.86 14.12 AFFX-TRP 1.7 A 3.0 A 19.4 A 8.05 11.17 AFFX-R2-EC-BIOB 583.8 P 818.6 P 744.6 P 715.66 1.28 AFFX-R2-EC-BIOC 1823.7 P 2062.3 P 1942.97 1.13 AFFX-R2-EC-BIOD 6885.9 P 8427.1 P 7656.49 1.22 AFFX-R2-P1-CRE 25867.2 P 33446.6 P 29656.90 1.29 AFFX-R2-BS-DAP 293.9 P 2280.7 P 3973.5 P 2182.70 13.52 AFFX-R2-BS-LYS 32.7 A 252.7 P 317.7 P 201.07 9.70 AFFX-R2-BS-PHE 151.4 P 341.6 P 1012.7 P 501.92 6.69 AFFX-R2-BS-THR 120.2 P 491.6 P 1563.9 P 725.25 13.01 ______________________________________________________________________