Report Type: Expression Report Date: 04:46PM 05/25/2006 ______________________________________________________________________ Filename: KPL_gd12_15_epididymus_Mouse430_2_KWGU011601_b.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.750 Scale Factor (SF): 5.261 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 56.96 Std: 0.79 Min: 54.10 Max: 58.70 Noise: Avg: 2.95 Std: 0.17 Min: 2.60 Max: 3.40 Corner+ Avg: 76 Count: 32 Corner- Avg: 7943 Count: 32 Central- Avg: 9442 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22303 49.5% Number Absent: 22091 49.0% Number Marginal: 707 1.6% Average Signal (P): 1512.8 Average Signal (A): 55.9 Average Signal (M): 159.8 Average Signal (All): 778.0 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 12736.9 P 16909.4 P 33357.2 P 21001.14 2.62 AFFX-GAPDHMUR/M32599 5134.7 P 12076.9 P 22247.8 P 13153.15 4.33 AFFX-TRANSRECMUR/X57349 8.3 A 4.9 A 146.4 P 53.23 17.56 AFFX-PYRUCARBMUR/L09192 75.2 A 74.9 A 424.2 P 191.41 5.64 AFFX-18SRNAMUR/X00686 14981.5 P 5899.0 P 7343.1 P 9407.89 0.49 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 412.1 P 629.4 P 343.9 P 461.80 0.83 AFFX-BIOC 1249.9 P 1415.8 P 1332.84 1.13 AFFX-BIOD 2367.5 P 5051.3 P 3709.45 2.13 AFFX-CRE 14684.1 P 20223.4 P 17453.76 1.38 AFFX-DAP 195.8 P 1118.2 P 2201.9 P 1171.97 11.24 AFFX-LYS 48.5 A 170.2 P 567.0 P 261.88 11.70 AFFX-PHE 96.7 P 251.0 P 463.8 P 270.49 4.80 AFFX-THR 86.0 A 216.7 P 848.9 P 383.86 9.87 AFFX-TRP 6.6 A 3.2 A 3.5 A 4.45 0.54 AFFX-R2-EC-BIOB 614.3 P 657.3 P 549.2 P 606.95 0.89 AFFX-R2-EC-BIOC 1611.8 P 1750.3 P 1681.06 1.09 AFFX-R2-EC-BIOD 6165.1 P 5901.5 P 6033.30 0.96 AFFX-R2-P1-CRE 21171.4 P 31296.0 P 26233.71 1.48 AFFX-R2-BS-DAP 199.9 P 1481.7 P 2630.4 P 1437.30 13.16 AFFX-R2-BS-LYS 57.0 A 202.7 P 269.0 P 176.21 4.72 AFFX-R2-BS-PHE 97.2 P 239.0 P 702.0 P 346.06 7.22 AFFX-R2-BS-THR 139.8 P 392.9 P 1038.6 P 523.78 7.43 ______________________________________________________________________