Report Type: Expression Report Date: 10:35AM 04/05/2007 ______________________________________________________________________ Filename: GT3_Mouse430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.300 Scale Factor (SF): 5.477 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 41.62 Std: 0.21 Min: 41.00 Max: 42.30 Noise: Avg: 2.05 Std: 0.04 Min: 1.90 Max: 2.20 Corner+ Avg: 127 Count: 32 Corner- Avg: 16825 Count: 32 Central- Avg: 17412 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 24398 54.1% Number Absent: 19977 44.3% Number Marginal: 726 1.6% Average Signal (P): 3975.4 Average Signal (A): 104.3 Average Signal (M): 424.3 Average Signal (All): 2203.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 9118.5 P 25280.9 P 40306.1 P 24901.82 4.42 AFFX-GapdhMur/M32599 900.6 P 5269.9 P 12672.4 P 6280.96 14.07 AFFX-TransRecMur/X57349 162.9 P 97.5 A 617.5 P 292.65 3.79 AFFX-PyruCarbMur/L09192 183.8 A 316.3 A 719.2 P 406.40 3.91 AFFX-18SRNAMur/X00686 42009.1 P 82158.1 P 60293.7 P 61487.01 1.44 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1431.2 P 2344.2 P 1150.7 P 1642.01 0.80 AFFX-BioC 1380.3 P 1729.4 P 1554.84 1.25 AFFX-BioD 10420.9 P 19235.2 P 14828.04 1.85 AFFX-Cre 54849.8 P 68084.1 P 61466.98 1.24 AFFX-Dap 45.5 M 58.1 A 6.1 A 36.55 0.13 AFFX-Lys 3.1 A 25.2 A 25.3 A 17.86 8.24 AFFX-Phe 7.7 A 2.9 A 120.4 A 43.66 15.65 AFFX-Thr 44.4 A 16.4 A 10.3 A 23.73 0.23 AFFX-Trp 36.4 A 7.9 A 1.2 A 15.17 0.03 AFFX-r2-Ec-bioB 2169.5 P 2352.0 P 2044.2 P 2188.56 0.94 AFFX-r2-Ec-bioC 2101.4 P 2314.5 P 2207.92 1.10 AFFX-r2-Ec-bioD 23599.8 P 28819.0 P 26209.44 1.22 AFFX-r2-P1-cre 61716.7 P 84538.8 P 73127.73 1.37 AFFX-r2-Bs-dap 4.9 A 14.5 A 16.1 A 11.86 3.27 AFFX-r2-Bs-lys 2.0 A 2.9 A 6.3 A 3.73 3.12 AFFX-r2-Bs-phe 16.7 A 14.6 A 69.7 A 33.65 4.18 AFFX-r2-Bs-thr 41.3 P 26.8 A 6.5 A 24.86 0.16 ______________________________________________________________________