Report Type: Expression Report Date: 01:27PM 11/06/2008 ______________________________________________________________________ Filename: Ureter_e15_071010_9_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.770 Scale Factor (SF): 3.304 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 53.39 Std: 0.85 Min: 50.80 Max: 55.50 Noise: Avg: 3.66 Std: 0.18 Min: 3.30 Max: 4.30 Corner+ Avg: 328 Count: 32 Corner- Avg: 20786 Count: 32 Central- Avg: 19600 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 24415 54.1% Number Absent: 19991 44.3% Number Marginal: 695 1.5% Average Signal (P): 3903.6 Average Signal (A): 103.7 Average Signal (M): 364.4 Average Signal (All): 2164.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 12348.0 P 31227.5 P 49450.9 P 31008.81 4.00 AFFX-GapdhMur/M32599 1833.6 P 5302.3 P 30016.0 P 12383.94 16.37 AFFX-TransRecMur/X57349 301.1 P 326.7 P 2171.2 P 932.99 7.21 AFFX-PyruCarbMur/L09192 322.2 A 487.4 P 854.0 P 554.53 2.65 AFFX-18SRNAMur/X00686 41767.0 P 59270.6 P 49633.8 P 50223.82 1.19 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1407.6 P 2938.7 P 1784.1 P 2043.45 1.27 AFFX-BioC 4311.8 P 6310.7 P 5311.27 1.46 AFFX-BioD 7876.8 P 18291.4 P 13084.12 2.32 AFFX-Cre 45470.8 P 48339.3 P 46905.03 1.06 AFFX-Dap 62.7 A 18.5 A 52.4 A 44.53 0.83 AFFX-Lys 1.5 A 7.1 A 4.8 A 4.44 3.25 AFFX-Phe 2.3 A 1.8 A 38.3 A 14.14 16.49 AFFX-Thr 46.4 A 5.9 A 8.8 A 20.35 0.19 AFFX-Trp 60.6 A 4.3 A 17.7 A 27.52 0.29 AFFX-r2-Ec-bioB 2762.6 P 2763.2 P 2520.6 P 2682.17 0.91 AFFX-r2-Ec-bioC 6008.1 P 7059.0 P 6533.53 1.17 AFFX-r2-Ec-bioD 18846.1 P 25647.6 P 22246.88 1.36 AFFX-r2-P1-cre 47091.8 P 60995.6 P 54043.70 1.30 AFFX-r2-Bs-dap 4.0 A 2.6 A 3.1 A 3.26 0.77 AFFX-r2-Bs-lys 21.1 A 12.8 A 57.9 A 30.60 2.75 AFFX-r2-Bs-phe 1.5 A 1.6 A 64.6 A 22.54 43.37 AFFX-r2-Bs-thr 92.3 P 151.3 A 49.7 A 97.80 0.54 ______________________________________________________________________