Report Type: Expression Report Date: 01:26PM 09/16/2008 ______________________________________________________________________ Filename: L_URT3_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.560 Scale Factor (SF): 3.872 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 50.62 Std: 0.62 Min: 48.60 Max: 51.60 Noise: Avg: 3.02 Std: 0.11 Min: 2.80 Max: 3.30 Corner+ Avg: 289 Count: 32 Corner- Avg: 18802 Count: 32 Central- Avg: 19354 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 23134 51.3% Number Absent: 21299 47.2% Number Marginal: 668 1.5% Average Signal (P): 4011.5 Average Signal (A): 99.9 Average Signal (M): 395.0 Average Signal (All): 2110.7 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 2868.4 P 9007.3 P 21383.8 P 11086.49 7.45 AFFX-GapdhMur/M32599 1680.4 P 11371.6 P 31713.0 P 14921.70 18.87 AFFX-TransRecMur/X57349 245.7 P 95.3 A 1883.5 P 741.50 7.67 AFFX-PyruCarbMur/L09192 141.0 A 516.6 P 1475.3 P 710.95 10.47 AFFX-18SRNAMur/X00686 12813.0 P 29654.7 P 13767.2 P 18745.00 1.07 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1408.0 P 2727.3 P 1475.1 P 1870.14 1.05 AFFX-BioC 4108.8 P 5642.2 P 4875.47 1.37 AFFX-BioD 7756.2 P 15567.4 P 11661.78 2.01 AFFX-Cre 35779.9 P 40574.2 P 38177.05 1.13 AFFX-Dap 38.6 A 5.3 A 31.3 A 25.07 0.81 AFFX-Lys 3.1 A 13.5 A 27.8 A 14.80 8.91 AFFX-Phe 9.0 A 2.7 A 85.4 A 32.35 9.54 AFFX-Thr 78.2 A 6.2 A 47.1 A 43.85 0.60 AFFX-Trp 79.1 M 6.4 A 4.3 A 29.97 0.05 AFFX-r2-Ec-bioB 2586.6 P 2717.1 P 2453.4 P 2585.66 0.95 AFFX-r2-Ec-bioC 5257.4 P 6534.8 P 5896.10 1.24 AFFX-r2-Ec-bioD 19420.5 P 22163.4 P 20791.95 1.14 AFFX-r2-P1-cre 38245.1 P 53175.9 P 45710.49 1.39 AFFX-r2-Bs-dap 6.4 A 2.3 A 1.5 A 3.38 0.23 AFFX-r2-Bs-lys 3.5 A 9.0 A 34.5 A 15.67 9.74 AFFX-r2-Bs-phe 3.9 A 13.4 A 60.9 A 26.08 15.71 AFFX-r2-Bs-thr 53.3 P 103.5 A 12.1 A 56.34 0.23 ______________________________________________________________________