Report Type: Expression Report Date: 01:32PM 07/06/2005 ______________________________________________________________________ Filename: 40_B_MOE_430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.890 Scale Factor (SF): 4.686 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 57.31 Std: 1.22 Min: 54.30 Max: 59.90 Noise: Avg: 2.85 Std: 0.10 Min: 2.60 Max: 3.10 Corner+ Avg: 75 Count: 32 Corner- Avg: 11638 Count: 32 Central- Avg: 12170 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 26152 58.0% Number Absent: 18264 40.5% Number Marginal: 685 1.5% Average Signal (P): 3523.1 Average Signal (A): 77.1 Average Signal (M): 217.3 Average Signal (All): 2077.4 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-B-ACTINMUR/M12481 31369.3 P 31287.6 P 48746.1 P 37134.32 1.55 AFFX-GAPDHMUR/M32599 35078.9 P 35273.2 P 37055.4 P 35802.49 1.06 AFFX-TRANSRECMUR/X57349 79.5 P 85.0 A 384.8 P 183.12 4.84 AFFX-PYRUCARBMUR/L09192 200.0 A 132.7 A 570.6 P 301.11 2.85 AFFX-18SRNAMUR/X00686 36236.9 P 14251.2 P 9081.8 P 19856.66 0.25 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 733.2 P 1428.8 P 701.9 P 954.63 0.96 AFFX-BIOC 2369.9 P 3042.7 P 2706.29 1.28 AFFX-BIOD 4638.4 P 9240.8 P 6939.60 1.99 AFFX-CRE 26345.6 P 30421.3 P 28383.46 1.15 AFFX-DAP 32.2 A 12.2 A 49.5 A 31.30 1.54 AFFX-LYS 16.2 A 10.4 A 5.9 A 10.83 0.36 AFFX-PHE 1.7 A 3.6 A 20.6 A 8.65 11.98 AFFX-THR 18.1 A 6.2 A 5.7 A 10.00 0.31 AFFX-TRP 17.1 A 5.7 A 4.2 A 8.99 0.25 AFFX-R2-EC-BIOB 1233.0 P 1296.8 P 1267.7 P 1265.81 1.03 AFFX-R2-EC-BIOC 3160.3 P 3670.2 P 3415.27 1.16 AFFX-R2-EC-BIOD 12174.2 P 12170.6 P 12172.39 1.00 AFFX-R2-P1-CRE 31996.1 P 41819.1 P 36907.58 1.31 AFFX-R2-BS-DAP 5.4 A 5.9 A 1.6 A 4.27 0.29 AFFX-R2-BS-LYS 2.2 A 2.0 A 62.0 P 22.05 28.23 AFFX-R2-BS-PHE 6.2 A 23.6 A 4.9 A 11.55 0.79 AFFX-R2-BS-THR 23.2 A 16.0 A 5.4 A 14.86 0.23 ______________________________________________________________________