Report Type: Expression Report Date: 01:28PM 11/06/2008 ______________________________________________________________________ Filename: Vropl_5-ve_091008_MOE430_2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.240 Scale Factor (SF): 14.708 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 38.68 Std: 0.43 Min: 37.90 Max: 39.80 Noise: Avg: 2.05 Std: 0.05 Min: 1.90 Max: 2.20 Corner+ Avg: 291 Count: 32 Corner- Avg: 18199 Count: 32 Central- Avg: 17830 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 17347 38.5% Number Absent: 26999 59.9% Number Marginal: 755 1.7% Average Signal (P): 7450.6 Average Signal (A): 193.5 Average Signal (M): 657.4 Average Signal (All): 2992.5 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 17715.7 P 68998.7 P 128700.4 P 71804.93 7.26 AFFX-GapdhMur/M32599 1590.0 P 5087.8 P 20287.4 P 8988.43 12.76 AFFX-TransRecMur/X57349 403.1 A 108.5 A 701.1 P 404.24 1.74 AFFX-PyruCarbMur/L09192 275.0 A 661.9 A 364.7 P 433.86 1.33 AFFX-18SRNAMur/X00686 53629.7 P 219352.0 P 121026.8 P 131336.16 2.26 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 11354.1 P 19260.7 P 12831.5 P 14482.12 1.13 AFFX-BioC 32280.7 P 37529.1 P 34904.92 1.16 AFFX-BioD 61022.7 P 102720.5 P 81871.59 1.68 AFFX-Cre 243627.3 P 249080.3 P 246353.78 1.02 AFFX-Dap 12.9 A 66.9 A 18.5 A 32.74 1.44 AFFX-Lys 53.8 A 68.5 A 113.4 A 78.56 2.11 AFFX-Phe 15.9 A 20.4 A 278.1 A 104.83 17.44 AFFX-Thr 356.9 P 11.4 A 40.7 A 136.34 0.11 AFFX-Trp 109.6 A 13.0 A 52.3 A 58.32 0.48 AFFX-r2-Ec-bioB 18056.0 P 20781.0 P 17332.9 P 18723.29 0.96 AFFX-r2-Ec-bioC 47969.2 P 45817.4 P 46893.28 0.96 AFFX-r2-Ec-bioD 123603.4 P 153659.9 P 138631.66 1.24 AFFX-r2-P1-cre 243686.6 P 292092.3 P 267889.44 1.20 AFFX-r2-Bs-dap 10.3 A 89.6 A 37.3 A 45.76 3.61 AFFX-r2-Bs-lys 18.4 A 11.9 A 65.6 A 31.96 3.57 AFFX-r2-Bs-phe 92.2 A 5.4 A 166.3 A 87.99 1.80 AFFX-r2-Bs-thr 93.6 A 244.6 A 172.8 A 170.29 1.85 ______________________________________________________________________