Report Type: Expression Report Date: 12:07PM 02/01/2008 ______________________________________________________________________ Filename: 2951 MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.340 Scale Factor (SF): 3.946 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.51 Std: 0.40 Min: 40.90 Max: 43.20 Noise: Avg: 2.13 Std: 0.07 Min: 2.00 Max: 2.40 Corner+ Avg: 203 Count: 32 Corner- Avg: 15510 Count: 32 Central- Avg: 14759 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 21768 48.3% Number Absent: 22651 50.2% Number Marginal: 682 1.5% Average Signal (P): 4602.5 Average Signal (A): 63.1 Average Signal (M): 324.2 Average Signal (All): 2258.0 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 2018.0 P 5463.2 P 17127.4 P 8202.89 8.49 AFFX-GapdhMur/M32599 2086.6 P 14337.3 P 39809.6 P 18744.51 19.08 AFFX-TransRecMur/X57349 51.8 A 60.9 P 1181.3 P 431.31 22.82 AFFX-PyruCarbMur/L09192 138.6 A 212.0 A 1153.4 P 501.33 8.32 AFFX-18SRNAMur/X00686 10727.5 P 44611.8 P 24764.3 P 26701.18 2.31 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1274.7 P 2271.5 P 1260.0 P 1602.05 0.99 AFFX-BioC 4102.2 P 5245.7 P 4673.96 1.28 AFFX-BioD 7993.2 P 13968.9 P 10981.06 1.75 AFFX-Cre 43830.6 P 49944.9 P 46887.77 1.14 AFFX-Dap 62.4 P 21.6 A 40.8 A 41.59 0.65 AFFX-Lys 1.7 A 22.6 A 36.1 P 20.14 20.65 AFFX-Phe 3.9 A 1.5 A 54.6 A 20.03 13.85 AFFX-Thr 30.0 A 31.4 A 4.7 A 22.04 0.16 AFFX-Trp 60.6 A 2.6 A 19.6 A 27.61 0.32 AFFX-r2-Ec-bioB 2894.6 P 2069.3 P 1808.4 P 2257.45 0.62 AFFX-r2-Ec-bioC 5372.6 P 7141.7 P 6257.17 1.33 AFFX-r2-Ec-bioD 18690.8 P 21967.2 P 20329.01 1.18 AFFX-r2-P1-cre 49320.8 P 70712.8 P 60016.83 1.43 AFFX-r2-Bs-dap 3.8 A 0.8 A 1.4 A 2.03 0.38 AFFX-r2-Bs-lys 20.8 A 2.6 A 61.3 A 28.22 2.94 AFFX-r2-Bs-phe 3.6 A 3.4 A 3.3 A 3.46 0.92 AFFX-r2-Bs-thr 57.6 P 83.9 A 1.8 A 47.79 0.03 ______________________________________________________________________