Report Type: Expression Report Date: 12:07PM 02/01/2008 ______________________________________________________________________ Filename: 2865 MOE430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.330 Scale Factor (SF): 5.928 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.73 Std: 0.36 Min: 41.30 Max: 43.50 Noise: Avg: 2.17 Std: 0.09 Min: 1.90 Max: 2.40 Corner+ Avg: 267 Count: 32 Corner- Avg: 16099 Count: 32 Central- Avg: 16134 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22417 49.7% Number Absent: 21926 48.6% Number Marginal: 758 1.7% Average Signal (P): 4548.6 Average Signal (A): 108.8 Average Signal (M): 347.9 Average Signal (All): 2319.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 3300.5 P 10073.3 P 26258.9 P 13210.90 7.96 AFFX-GapdhMur/M32599 505.0 P 4054.3 P 13699.7 P 6086.36 27.13 AFFX-TransRecMur/X57349 4.9 A 79.6 A 676.9 P 253.79 136.92 AFFX-PyruCarbMur/L09192 100.3 A 400.9 M 671.3 P 390.80 6.69 AFFX-18SRNAMur/X00686 22458.5 P 82115.0 P 34583.5 P 46385.68 1.54 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2166.4 P 3393.1 P 2179.2 P 2579.57 1.01 AFFX-BioC 6350.3 P 8542.7 P 7446.50 1.35 AFFX-BioD 13269.5 P 22331.0 P 17800.24 1.68 AFFX-Cre 71191.9 P 80521.2 P 75856.52 1.13 AFFX-Dap 61.5 A 10.3 A 21.3 A 31.01 0.35 AFFX-Lys 2.1 A 15.1 A 46.6 M 21.25 22.72 AFFX-Phe 5.2 A 2.6 A 168.4 A 58.76 32.09 AFFX-Thr 51.3 A 12.4 A 16.5 A 26.72 0.32 AFFX-Trp 76.3 A 4.5 A 5.0 A 28.59 0.07 AFFX-r2-Ec-bioB 3581.5 P 3637.6 P 3014.3 P 3411.11 0.84 AFFX-r2-Ec-bioC 9275.6 P 11414.3 P 10344.91 1.23 AFFX-r2-Ec-bioD 29963.7 P 35686.6 P 32825.18 1.19 AFFX-r2-P1-cre 79219.2 P 102783.8 P 91001.52 1.30 AFFX-r2-Bs-dap 16.4 A 2.8 A 18.7 A 12.62 1.14 AFFX-r2-Bs-lys 1.7 A 56.0 A 21.7 A 26.45 13.10 AFFX-r2-Bs-phe 5.0 A 3.2 A 49.9 A 19.39 9.96 AFFX-r2-Bs-thr 32.9 A 89.5 A 9.4 A 43.95 0.29 ______________________________________________________________________